| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2521 |
|---|
| Symbol | |
|---|
| ID | 5353598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2534735 |
|---|
| End bp | 2536291 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640811572 |
|---|
| Product | modification methylase DdeI |
|---|
| Protein accession | YP_001347885 |
|---|
| Protein GI | 152984997 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCGA GGCGACGGTC CCAAGGGAAA CAGACTGATG TAGCCCAAAT TGGCGCGGAG
TATGCCTCGA TGGAGACGAA GGTCCCACAC CTTGAAGGCT ATACAAGCAA TGGTCCTGGA
CTACAGCTGA CGCTCCTTCC CCCCCACATA GATCCATCTG GGCAGGAGCC CATGAAGCAG
AACGAGAATT TCCCCCCCTT ACCCCCCCTG GACCAGCCCC TAAAGTTTGC CGACCTATTT
GCAGGTTGCG GCGGGCTATC CTTGGGCCTT TCGCTCGCAG GGCTGAATGG AGTGTTCGCC
GTAGAACGCG ACAAGATGGC GTTCTCGACG TTGTCTACGA ACCTGATTGA GAGGAAGGAT
GTTCCCATCA CTCCATTCGC CTGGCCTTCC TGGCTAGAGA AGCAAGCCTG GGGCATCGAT
GACATCCTCG ACCAGCACGG TGCTGAGCTC GCATCCCTGC GAGGAAAAAT ACAGGTACTT
GCAGGCGGCC CCCCCTGCCA AGGATTCAGC TTCGCAGGGA GACGACAGGA GGCCGATCCT
CGCAACAAGC TGTTCGAGAA GTATGTGGAG ATGGTTAGAG CCATCCAGCC AGCAGCGCTC
GTTCTGGAAA ATGTTCCAGG AATGAAGGTG GCCCACGCCA CTAAGGGACG AGAGCTGGTG
AAGGAGATTT CGAAGGAGCG AGGACTACAG ATCAAACCAC AGTCCTACTA TGACAAGCTG
GTCGAAAGCC TGACTAGGAT CGGTTATCAG GTCCTTGGCA AGATTGTCGA TTCTTCTCTA
TTCGGGGTTC CGCAAAAGCG CCCACGCCTA ATCGTGATCG GCCTCCGCCA AGATCTGGCC
AATCATCTCG TCGGAGGCAT GGACAGAGCG TTTGACCTGC TCGAGGAAGC TCGTCGCAAA
CAGTTGCAAG ACCTCGACCT TCCCGATCAG GTCCGTGCCG TAGATGCCAT TTCGGACCTA
GAGATGAGGG GGCGCGGTAC AAGACCTTGC AGTGACGACG ACTCCCCCAA AGGGTTTGAG
GAAATCCGCT ATACCGGCCC CCGAACTCAT TTCCAGCGAT TGATGCACCG GGACTGTGTC
GGCGACGTTG ACAGTTTGCG ACTGGCGAGA CACCGGGCCG AAGTCAGGGA TAGGTTCCAA
GCAATTATCA GTGACAAGGA ATGCGCCAAG GGCGTACGCA TGAGCGCCAA GCTTCGTGAG
AAATATGGGC TCAAGAAACA TCGCATCTAC CCAATGCAGG CAAACACGCC CGCCCCTACG
ATCACCACCC TGCCGGATGA CGTCCTACAT TACAGCGAGC CTAGGATATT GACCGTCAGG
GAGTCTGCGC GACTGCAGTC GTTCCCTGAT TGGTTCAGGT TCCGCGGCAA GTTCACGACT
GGGGGCAGCC AGCGTACAAA GGAATGTCCA CGTTATACCC AGGTTGGCAA CGCTGTGCCT
CCCTATCTTG CCAGGGCCAT TGGCATGGCG ATCCAGGCAA TGCTGAAAGA GACCGTGGCG
CTAGCAAAAG AGCAGGCGGA ACTCGAGCAA GAAGAAGAAA TGATAGCCAT CGCTTGA
|
|---|
| Protein sequence | MPARRRSQGK QTDVAQIGAE YASMETKVPH LEGYTSNGPG LQLTLLPPHI DPSGQEPMKQ
NENFPPLPPL DQPLKFADLF AGCGGLSLGL SLAGLNGVFA VERDKMAFST LSTNLIERKD
VPITPFAWPS WLEKQAWGID DILDQHGAEL ASLRGKIQVL AGGPPCQGFS FAGRRQEADP
RNKLFEKYVE MVRAIQPAAL VLENVPGMKV AHATKGRELV KEISKERGLQ IKPQSYYDKL
VESLTRIGYQ VLGKIVDSSL FGVPQKRPRL IVIGLRQDLA NHLVGGMDRA FDLLEEARRK
QLQDLDLPDQ VRAVDAISDL EMRGRGTRPC SDDDSPKGFE EIRYTGPRTH FQRLMHRDCV
GDVDSLRLAR HRAEVRDRFQ AIISDKECAK GVRMSAKLRE KYGLKKHRIY PMQANTPAPT
ITTLPDDVLH YSEPRILTVR ESARLQSFPD WFRFRGKFTT GGSQRTKECP RYTQVGNAVP
PYLARAIGMA IQAMLKETVA LAKEQAELEQ EEEMIAIA
|
|---|
| |