Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2448 |
Symbol | |
ID | 5358290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2480793 |
End bp | 2481692 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640811500 |
Product | AraC family transcription regulator |
Protein accession | YP_001347815 |
Protein GI | 152984212 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0683308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGCCTT CCCTTTCCCG TACGGTCGAG CAGGTGCGCT ACGCGCCGCC GGGCGAATAT GCCCTCGACC TGGAGGTCGT CGCCTTCGAC GAATTGCGTC GGCGTACCAC CCCGGCCCAC CTGCACGCCT TGCAACGCAC CGACTTCCAC CTGTTGCTGG CCGTCACCCG CGGATGCTGC ACCCACTGGA TCGACTTCCG CCCGCACCGC GCGGAAGCCG GCAACTGGCT GGTCATCCAG CCTGGCCAGG TGCATCGTTT CGACGGCAGC GCCGACTGGT CCGGCTGGCT GCTGCTGTTC CGCCCCGAGT TCCTCGCCCC GCCCGGGCGC GGCGGAACGG CCGAGGAACT GGCGGTCGGC GTCTGCCTCG AGGCCCTGCC CGCGCTCCTC GCGCCCGCCG CCGACGAGCG ACGCAGCTGC TTGCAGGCGC TGCGGCAGAT GGCCCGCGAC GCCCGGCTCC GGCAAAGCCG CGCCGTGCGC CACAGCCTGC TGCGCCACCA GTTGCAGGCA CTGCTCCTGC GCCTCGACCT GGTCGCCCGC GACTCCCGGC TCGCGCCGCT CGCCAGCGGC GCCGAACTGC AGCGCTTCAA CCGCTTCAGG GAGGCGGTGA CGGGAAACTT CCAGCGTCAT CACCGGATCG GCGAGTACGC CCGTCTGCTC GGTATTTCCG AACGCAGCCT GAGCCGCGCC AGCCAGGCGG TGGCCGGGGT CACCGCGAAG GCCTGGCTGT CGGCGCGGAT CGCCCTGGAG GCCAGGCGCC TGCTCGCGCA TACCGACGAA ACGGTGGCGG CCATCGCCGA ACGCCTCGGC TTCGACGAGC CAAGTAACTT CGTCAAGTTC TTCAAGCGCG AGACCGGCCA GGTGCCCGGC GCCTTCCGCC GCGAGCAGCG TGGCGGCTGA
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Protein sequence | MQPSLSRTVE QVRYAPPGEY ALDLEVVAFD ELRRRTTPAH LHALQRTDFH LLLAVTRGCC THWIDFRPHR AEAGNWLVIQ PGQVHRFDGS ADWSGWLLLF RPEFLAPPGR GGTAEELAVG VCLEALPALL APAADERRSC LQALRQMARD ARLRQSRAVR HSLLRHQLQA LLLRLDLVAR DSRLAPLASG AELQRFNRFR EAVTGNFQRH HRIGEYARLL GISERSLSRA SQAVAGVTAK AWLSARIALE ARRLLAHTDE TVAAIAERLG FDEPSNFVKF FKRETGQVPG AFRREQRGG
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