Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2387 |
Symbol | |
ID | 5357010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2428399 |
End bp | 2428770 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640811439 |
Product | regulatory protein |
Protein accession | YP_001347754 |
Protein GI | 152986469 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.240856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATCC TCACTCGCCG AGTCGGCGAA ACCCTGCACA TTGGCGACGA CATCACCGTG ACGGTCCTCG GCAGCCAGGG CGACCAGGTG CGCCTCGGCA TCACCGCCCC GGACGACGTC GCCATTCACC GCTCCGAGAT CTACCAGCAG ATCGGCAACG TCCGTCCGGT GCCACCGGCG GAGCTGGTCG AGGCCTGGAA CCGAGAGCAC CCAGCGCCAG CCCTGATCGA GTACCGCCCG TACCGAGGGG CAGACCCGCA GCGCACCCGC ACCGTCGGCC GGGCCAGCGT ATCGCTTGGC GGAGCGGCGG TTATCTGGAT CGAAGGCCAG TCGGCGCCGG TGGCGTTGCG AGCCTGCACC GCGATCTCCT GA
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Protein sequence | MLILTRRVGE TLHIGDDITV TVLGSQGDQV RLGITAPDDV AIHRSEIYQQ IGNVRPVPPA ELVEAWNREH PAPALIEYRP YRGADPQRTR TVGRASVSLG GAAVIWIEGQ SAPVALRACT AIS
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