| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2348 |
|---|
| Symbol | |
|---|
| ID | 5359065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2400997 |
|---|
| End bp | 2401683 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640811400 |
|---|
| Product | putative two-component response regulator |
|---|
| Protein accession | YP_001347715 |
|---|
| Protein GI | 152986242 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.804247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGA AACTGCTGAT CGTCGAAGAC GAACCACGTA TCGGCCAGTA CCTGCGCCAG
GGGCTCGCCG AGTCCGGCTA CGCCGTCGAC CTGAGCGACG ACGGCAACGA GGGCGAGCAA
TTGGCCCTGG GCGGCGACTA TGACCTGCTG ATCCTCGACG TCATGCTGCC CGGCCGGGAC
GGCTGGCAGA TCCTGCGCAG CGTGCGCGAC GCCGGAATGA CCGTGCCGGT GCTGTTCCTC
ACCGCCCGCG ACGCCGTCGA GGACCGCGTG CGCGGCCTGG AACAGGGCGC CGACGATTAC
CTGGTGAAGC CCTTCGCCTT CGTCGAGTTG CTCGCCCGCG TGCGCACCCT GCTGCGCCGT
GGCAACCAGC AGTTGCAGGA GACCACCCTG CAACTGGCCG ATCTCGAACT CGACCTGCTG
CGTCGCCGGG TGCAGCGCCA GGGCAAGCGC ATCGACCTGA CCGCCAAGGA ATTCGCCCTG
CTCGAACTGC TGTTGCGGCG CAGCGGCGAG GTGCTGCCCA AGTCGCTGAT CGCCTCGCAG
GTCTGGGACA TGAACTTCGA CAGCGACACC AACGTCATCG AGGTCGCCAT CCGCCGCCTG
CGCGCCAAGG TCGACGACGA CTTCCCGCAG CGCCTGATCC ATACCGTGCG CGGCATGGGC
TACGTCCTCG AAGAACGCGA CGAATGA
|
|---|
| Protein sequence | MNMKLLIVED EPRIGQYLRQ GLAESGYAVD LSDDGNEGEQ LALGGDYDLL ILDVMLPGRD
GWQILRSVRD AGMTVPVLFL TARDAVEDRV RGLEQGADDY LVKPFAFVEL LARVRTLLRR
GNQQLQETTL QLADLELDLL RRRVQRQGKR IDLTAKEFAL LELLLRRSGE VLPKSLIASQ
VWDMNFDSDT NVIEVAIRRL RAKVDDDFPQ RLIHTVRGMG YVLEERDE
|
|---|
| |