| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2312 |
|---|
| Symbol | |
|---|
| ID | 5355702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2365246 |
|---|
| End bp | 2366688 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640811364 |
|---|
| Product | 3-deoxy-7-phosphoheptulonate synthase |
|---|
| Protein accession | YP_001347682 |
|---|
| Protein GI | 152986097 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCC GCTATCGCAA TGATCGCTGG CGGCGCCGCG CCTGGCTGCT CTACCATGCC
GCAATCCGCT TTTCCGAGCA TCGCCAAGAG TCGCAGATGA GCCAGTCCTG GAGCCCCGAC
AGCTGGAGGG CCAAGCCAAT CCAGCAACAA CCCGAGTACC CCGACGCCGC CCACCTGGCC
AGGGTCGAAC AGACCCTCGC CGGCTATCCT CCGCTGGTCT TCGCCGGCGA GGCCCGCGAG
CTGCGCCGAC AGTTCGCCGA AGTCACCGCC GGGCGCGCCT TCCTGCTCCA GGGCGGCGAC
TGTGCGGAAA GCTTCGCCGA GTTCTCCGCG GCGAAGATCC GCGACACCTT CAAGGTCCTG
CTGCAGATGG CCGTGGTGAT GACTTTCGCC GCCGGCTGCC CGGTGGTGAA GGTCGGACGC
ATGGCCGGCC AGTTCGCCAA GCCGCGCTCC GCCGGCGACG AGACGCAGAA CGGCGTGACC
CTGCCGGCCT ATCGCGGCGA TATCGTCAAC GGCATCGGCT TCGACGAGAA GAGCCGCGTG
CCGGATCCGG AGCGCCTGTT GCAGGCCTAC CACCAGTCCA CCGCCAGCCT CAACCTGTTG
CGCGCCTTCG CCCAGGGCGG CTTCGCCGAC CTGCACCAGG TGCACCGCTG GAACCTCGAC
TTCATCGCCA ACTCGGCGCT CGCCGAGCGC TACCAGCAAC TGGCCGACCG CATCGACGAG
ACCCTCGCCT TCATGCGCGC CTGCGGCCTG GACAGCGCGC CGCAGCTACG CGAAACCAGC
TTCTTCACCG CCCACGAAGC GCTCCTGCTG AGCTACGAGG AAGCCCTGAC CCGCCGCGAC
AGCCTGACCG GCGAGTGGTA CGACTGCTCC GCGCACATGC TCTGGATCGG CGACCGCACC
CGCCAGCTCG ACGGCGCCCA CGTGGAGATG CTGCGCGGCG TCGGCAACCC GATCGGGGTC
AAGGTAGGGC CGAGCATGGA CGACGAGGAA CTGATCCGCC TGATCGACAT CCTCAACCCG
GAGAACGACC CCGGCCGCCT CAACCTGATC GTGCGGATGG GCGCCGACAA GGTCGGCGAC
CACCTGCCGC GCCTGATCCG GGCCATCCAG CGCGAGGGGC GCCAGGTGCT GTGGAGCTCC
GACCCGATGC ACGGCAACAC CATCAAGGCC TCCAGCGGCT ACAAGACCCG CGACTTCGCC
CGCGTGCTCG CCGAAGTCCG CCAGTTCTTC GAGGTGCACC AGGCCGAGGG CAGCTACGCC
GGCGGCATCC ATATCGAGAT GACCGGGCAG AACGTCACCG AGTGCATCGG CGGCTCGCGG
CCGATCACCG AGGACGGCCT CAGCGACCGC TACCATACCC ACTGCGACCC GCGGCTGAAC
GCCGACCAGT CGCTGGAGCT GGCCTTCCTC ATCGCCGAGA CGCTCAAGCA GGTGCGCCAC
TGA
|
|---|
| Protein sequence | MDFRYRNDRW RRRAWLLYHA AIRFSEHRQE SQMSQSWSPD SWRAKPIQQQ PEYPDAAHLA
RVEQTLAGYP PLVFAGEARE LRRQFAEVTA GRAFLLQGGD CAESFAEFSA AKIRDTFKVL
LQMAVVMTFA AGCPVVKVGR MAGQFAKPRS AGDETQNGVT LPAYRGDIVN GIGFDEKSRV
PDPERLLQAY HQSTASLNLL RAFAQGGFAD LHQVHRWNLD FIANSALAER YQQLADRIDE
TLAFMRACGL DSAPQLRETS FFTAHEALLL SYEEALTRRD SLTGEWYDCS AHMLWIGDRT
RQLDGAHVEM LRGVGNPIGV KVGPSMDDEE LIRLIDILNP ENDPGRLNLI VRMGADKVGD
HLPRLIRAIQ REGRQVLWSS DPMHGNTIKA SSGYKTRDFA RVLAEVRQFF EVHQAEGSYA
GGIHIEMTGQ NVTECIGGSR PITEDGLSDR YHTHCDPRLN ADQSLELAFL IAETLKQVRH
|
|---|
| |