| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2254 |
|---|
| Symbol | |
|---|
| ID | 5359168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2308896 |
|---|
| End bp | 2309705 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640811307 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_001347626 |
|---|
| Protein GI | 152984892 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.374257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGGA AAACCACGCT CCTCGCCACC CTGCTGGCCT GCGCCGCGCT GGCCGGCTGC
GCCGACCACA AGCTCAGCGA ACAGTCGCTG GCCAAGGCGC AGAGCGAGTT CGACCAGGTC
AAGGAAGATT CCGATGTGCT GCGCGCGGCG CCCAAGGACG TGATCCGCGC CGGCGAGTCG
CTGGCCCGTG CCGAGCGCCT GTCCAGCTAT TGGGGCAGCA GTAGCGACGT GATCCAGTAC
GCCTACCTGA GCCAGCGCTA CAGCGAGATC GCCCGCCAGC ATGCGCAGCT CAATCTCAAC
CAGGAGCGCC TGGTCCGCCT GCAACTGGAG CGCGAGCGCC TGCAACTGGC CCTGCGCGAA
GCCAAGCTGC TCAGCGTGCA GGAACAGGGC CAGCGCCTGA GCGAGGAAAT CGCCAGCCTC
AGCACCGAGG AAACCGAGCG CGGCCTGGTA CTGACCCTTG GCGACGTACT GTTCGACTTC
AACCGCGCCG AGCTCAAGCC GGCGGCCAAC CGCACCGCGC TGAAGCTGGT GCAGTTCCTC
CAGCTCAACC CGCGGCGGGT GATCCGCATC GAAGGCTACA CCGACAGCGT CGGCGACCGG
CAGGCCAACC TCGACCTGTC CCGCGCGCGC GCCCAGGCGG TGGCCGACGT GCTCGCCGAT
CTCGGCGTGG ATCCCGCGCG CATGCAGGTG GCCGGCTATG GCGAGGCCTT CCCGGTCACC
GACAACGCGT CCAATCGCGG ACGGGCGCAG AACCGCCGGG TGGAGATCGT CTTCTCCAAC
GACAAGGGCC AGCTCAGCGC GCCGCGCTGA
|
|---|
| Protein sequence | MSGKTTLLAT LLACAALAGC ADHKLSEQSL AKAQSEFDQV KEDSDVLRAA PKDVIRAGES
LARAERLSSY WGSSSDVIQY AYLSQRYSEI ARQHAQLNLN QERLVRLQLE RERLQLALRE
AKLLSVQEQG QRLSEEIASL STEETERGLV LTLGDVLFDF NRAELKPAAN RTALKLVQFL
QLNPRRVIRI EGYTDSVGDR QANLDLSRAR AQAVADVLAD LGVDPARMQV AGYGEAFPVT
DNASNRGRAQ NRRVEIVFSN DKGQLSAPR
|
|---|
| |