Gene PSPA7_2199 details

Gene Information

• Locus tag: PSPA7_2199
• Symbol: tmk
• ID: 5355132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 2253510
• End bp: 2254142
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640811252
• Product: thymidylate kinase
• Protein accession: YP_001347571
• Protein GI: 152985503
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.833111
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGGCC TGTTCGTCAC CCTGGAGGGC CCGGAAGGGG CCGGCAAGAG CACCAACCGC 
GACTACCTGG CCGAGCGCCT GCGCGAGCGC GGCGTCGAGG TGCAGTTGAC CCGCGAGCCT 
GGCGGCACGC CTCTCGCCGA ACGCATCCGT GAACTACTGC TGGCGCCCAG CGACGAGCCG 
ATGGCTGCCG ATACCGAGCT GTTGCTGATG TTCGCCGCGC GGGCCCAGCA TATCGCCGGG 
GTCATCCGCC CGGCGCTGGC GCGCGGGGCC GTGGTGCTCT GCGATCGCTT CACCGATGCC 
ACCTATGCCT ACCAGGGCGG CGGGCGCGGC TTGCCGGAGG CGCGCATCGC CGCGCTGGAA 
AGCTTCGTCC AGGGCGACCT GCGGCCCGAC CTCACGCTGG TCTTCGACCT GCCGGTGGAA 
ATCGGCCTGG CGCGGGCGGC GGCGCGGGGC CGGCTCGACC GTTTCGAGCA GGAGGACCGA 
CGTTTCTTCG AAGCCGTGCG GCAGACCTAC CTGCAGCGCG CCGCGCAGGC CCCGCAGCGT 
TACCAGGTGC TCGACGCCGG GTTGCCGCTG GCCGAGGTGC AGGCTGGCCT GGATCGGCTG 
CTGCCGAATC TGCTGGAGCG TCTGCATGGC TGA 

 

Protein sequence

MTGLFVTLEG PEGAGKSTNR DYLAERLRER GVEVQLTREP GGTPLAERIR ELLLAPSDEP 
MAADTELLLM FAARAQHIAG VIRPALARGA VVLCDRFTDA TYAYQGGGRG LPEARIAALE 
SFVQGDLRPD LTLVFDLPVE IGLARAAARG RLDRFEQEDR RFFEAVRQTY LQRAAQAPQR 
YQVLDAGLPL AEVQAGLDRL LPNLLERLHG