Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2175 |
Symbol | |
ID | 5354282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2230136 |
End bp | 2231380 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640811228 |
Product | hypothetical protein |
Protein accession | YP_001347547 |
Protein GI | 152988493 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGAC CGTTACCGTT CTTCATAGGC CTGCGCTACA CCCGCGCCAA ACGCCGCAAC CACTACATCT CGTTCATCTC GCTGACCTCG ATGATCGGCC TGGCGCTGGG CGTGCTGGCG ATGATCATCG TGCTCTCGGT GATGAACGGC TTCCAGAAGG AAATGCGCAC GCGCATCCTC GGCATGGTGC CGCACGCCAC GATCAGCGCG GCGCAGCCGC TGGACGACTG GCAGACCGTC GCCGCCGCGG CGCTGAAGCA CCGCGAGGTG GTCGGCGCGG CGCCGTTCGC CGAACTGCAG GGCATGCTGT CTTACAAGGG CAACATGCTG CCGGTGCTGG TCAACGGCAT AGACCCGCAG GAAGAGCGCA AGGTCTCCAT CGTCGGCGAG CACATCGTCC AGGGCAGCCT GGATGACCTC AAGCCTGGCG AGTTCGGCAT CGTCCTCGGC GAGATCACCG CGCGGCGCTT CCATGTCAAT GTCGGTGACA AGCTGACCCT GATCGTCCCG GAAGCCACCT CGGCGCCCGG CGGGATCACC CCGCGCATGC AGCGCTTCAC CATAGTCGCC CTGTTCAAGG TCGGCGCCGA ACTGGACAAC TCGCTGGCGC TGGTCGACAT CGCCGACGCC GGCCAGTTGC TGCGCCTGCA GCCGGGCCAG GTGCCCAGCG TGCGCCTGGA GCTGAAGGAT CTCTACCAGT CGCCGCAGGT CGCCGCCAAG GTGGTCAAGG AGTTGGGGCA GGGCTTCAGG TCCAGCGACT GGACCAGGAC CCAGGGCAGC CTGTTCAACG CGATGAAGAT GGAAAAGACC ATGATCGGCC TGCTCCTGCT GCTGATCATC GCGGTCGCCG CCTTCAATAT CATCGCCACC CTGATCATGG TGGTCGCCGA CAAGCGCACC GATATCGCCA TCCTCCGCAC CCTGGGGGCG ACGCCGCGGC AGATCATGGC GATCTTCATG GTCCAGGGCA CGGTCATCGG CGTGATCGGC ACGGTCATCG GCGGGGTGCT CGGGGTGCTC GCGGCGCTGA ACATCACCGG GGTGATCGAT CGCATCGAGC GGCTGGTCGG GCACAAGGTG TTCAGCTCGG ACGTGTACTT CATCAACTAC CTGCCTTCCG ACCTGCAGGT GCTGGACGTG GTGCTGATCT GCAGCGCTGC CTTGCTGATG AGCTTCCTCG CCACCCTGTA CCCGTCCTGG CGGGCGGCGC GGACCCAGCC GGCGGAGTCG TTGCGCTACG AGTGA
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Protein sequence | MFRPLPFFIG LRYTRAKRRN HYISFISLTS MIGLALGVLA MIIVLSVMNG FQKEMRTRIL GMVPHATISA AQPLDDWQTV AAAALKHREV VGAAPFAELQ GMLSYKGNML PVLVNGIDPQ EERKVSIVGE HIVQGSLDDL KPGEFGIVLG EITARRFHVN VGDKLTLIVP EATSAPGGIT PRMQRFTIVA LFKVGAELDN SLALVDIADA GQLLRLQPGQ VPSVRLELKD LYQSPQVAAK VVKELGQGFR SSDWTRTQGS LFNAMKMEKT MIGLLLLLII AVAAFNIIAT LIMVVADKRT DIAILRTLGA TPRQIMAIFM VQGTVIGVIG TVIGGVLGVL AALNITGVID RIERLVGHKV FSSDVYFINY LPSDLQVLDV VLICSAALLM SFLATLYPSW RAARTQPAES LRYE
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