| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2162 |
|---|
| Symbol | nqrC |
|---|
| ID | 5358455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2220242 |
|---|
| End bp | 2221027 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640811215 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit C |
|---|
| Protein accession | YP_001347534 |
|---|
| Protein GI | 152986440 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
|---|
| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATC AAGAATCCAC CACCCGCACG CTGCTGGTGG CCCTGGTGGT GTGCCTGGTC
AGCTCGGTGT TCGTCGCCGG CGCGGCGGTG GCGCTGAAGC CGACCCAGGC GGAGAACCGC
CTGCTCGACA AGCAGCGCAG CATCCTCGCC ATCGCCGGCC TGGGCCAGCC GGGCATGTCC
GGCAAAGAGG TCAAGGCGCT GTTCGACAGC CGCATCAGCG CCAGGGTGGT CGACCTGCAG
AGCGGCACCT TCAGCGATGC CCAGGACCCG ATCAGCTACG ATCCGCTCAA GGCGGCCAAG
GATCCGGCGC TGTCCGAAGC GCTGCCCGCC GCCCAGGACA TCGCCTCGAT CAAGCGCCGC
GAGCGCTACA CCACGGTGTA CCTGGTGGAG ACCGACGGCA AGCTCGACAC CCTGATCCTG
CCGGTGCGCG GCTACGGCCT GTGGTCGACC CTGTACGGCT TCCTCGCGCT CAAGGGAGAC
CTCAACACCG TCGCCGGCTT CGGCTTCTAC CAGCACGGCG AGACCCCCGG CCTCGGCGGC
GAGGTGGACA ATCCGAAATG GAAGGCGCTG TGGGTCGGCA AGACCCTGTA CGACGCGCAG
GGCGATCTCG CCGTGCAGAT CATCAAGGGT TCGGTGGACC CGCAGTCGGC CAAGGCGACC
CACCAGGTCG ACGGCCTGGC CGGCGCCACC CTGACCAGCA AGGGTGTCGA CAACCTGCTG
CATTTCTGGC TCGGCAAGGA CGGCTTCGAC GCCTTCCTCG CCAATCTGCG CAAAGGGGAG
GCGTGA
|
|---|
| Protein sequence | MANQESTTRT LLVALVVCLV SSVFVAGAAV ALKPTQAENR LLDKQRSILA IAGLGQPGMS
GKEVKALFDS RISARVVDLQ SGTFSDAQDP ISYDPLKAAK DPALSEALPA AQDIASIKRR
ERYTTVYLVE TDGKLDTLIL PVRGYGLWST LYGFLALKGD LNTVAGFGFY QHGETPGLGG
EVDNPKWKAL WVGKTLYDAQ GDLAVQIIKG SVDPQSAKAT HQVDGLAGAT LTSKGVDNLL
HFWLGKDGFD AFLANLRKGE A
|
|---|
| |