| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2100 |
|---|
| Symbol | |
|---|
| ID | 5359177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2151759 |
|---|
| End bp | 2152967 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640811153 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_001347473 |
|---|
| Protein GI | 152986153 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.390807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACC TGAATAGCGC GGTGCAAGTC CTGATCCACG GCTCCAATAC CCTGTTCATC
CTGCTCGGGG CGGTGATGGT GCTGGCGATG CACGCCGGCT TCGCCTTCCT CGAGGTCGGC
ACCGTGCGCC TGAAGAACCA GGTCAACGCC CTGTCGAAGA TCCTCTCCGA CTTCGCCATT
TCGGTGCTGG CCTATTTCTT CGTCGGTTAC TGGATCGCCT ACGGCGTGAC GTTCTTCCAT
CCGGCGGCGG CGCTGACGCT GGACAACGGT TACGCGCTGG TGAAGTTCTT CTTCCTGCTG
ACCTTCGCCG CGGCGATCCC GGCCATCATT TCCGGCGGCA TCGCCGAGCG CGCCCGTTTC
GGTCCGCAGC TGTGCGCCAC GGCGCTGATC GTGGCCTTCG TCTATCCGTT CTTCGAAGGC
CTGATCTGGA ACGGCAATTT CGGCCTGCAG GAATGGCTGA AGCTCGAGTT CGGCGCGGCT
TTCCACGATT TCGCCGGCTC CGTGGTAGTC CATGCCGTAG GCGGCTGGCT GGCGCTGGCG
GCGGTCCTGC TGCTGGGCAG CCGCAACGGC CGCTATCGCG ATGGCAAGCT GGTGGCGATG
GCGCCGTCGA ATATCCCGTT CCTGGCGCTG GGTTCGTGGA TCCTGATCAT CGGCTGGTTC
GGCTTCAACG TGATGAGCGC CCAGACCCTC GCCGGTGTCA GCGGGCTGGT GGCGGTCAAC
TCGCTGCTGG CGATGGTCGG CGGCACCATG GCTTCGCTGC TGATCGGCCG CAACGACCCG
GGTTTCCTGC ACAACGGTCC GCTGGCCGGG CTGGTGGCGG TGTGCGCCGG CTCCGACCTG
ATGCATCCGA TCGGCGCCCT GGCCACCGGC CTGGTAGCTG GCGGACTGTT CGTCTGGGCG
TTCACCGCGA CCCAGGTGCG CTGGAAGATC GACGACGTCC TCGGCGTCTG GCCACTGCAT
GGCCTCTGCG GAGTCTGGGG CGGGATCGCC TGCGGGATCT TCGGCCAGCA GGCGCTGGGC
GGGCTCGGCG GGGTGAGCCT GGCCAGCCAG GCGATCGGCA GCCTGCTGGG GGTAGCGGTG
GCGTTCGTCG GCGGCCTGCT GGTCTATGGG GCGATGAAGG CGCTGCTGGG TATCCGCCTG
AGCCAGGAGG AGGAGTACTA CGGCGCGGAC CTGTCGATCC ACAGGATCGG TGCGGTCAGT
CACGAATGA
|
|---|
| Protein sequence | MDNLNSAVQV LIHGSNTLFI LLGAVMVLAM HAGFAFLEVG TVRLKNQVNA LSKILSDFAI
SVLAYFFVGY WIAYGVTFFH PAAALTLDNG YALVKFFFLL TFAAAIPAII SGGIAERARF
GPQLCATALI VAFVYPFFEG LIWNGNFGLQ EWLKLEFGAA FHDFAGSVVV HAVGGWLALA
AVLLLGSRNG RYRDGKLVAM APSNIPFLAL GSWILIIGWF GFNVMSAQTL AGVSGLVAVN
SLLAMVGGTM ASLLIGRNDP GFLHNGPLAG LVAVCAGSDL MHPIGALATG LVAGGLFVWA
FTATQVRWKI DDVLGVWPLH GLCGVWGGIA CGIFGQQALG GLGGVSLASQ AIGSLLGVAV
AFVGGLLVYG AMKALLGIRL SQEEEYYGAD LSIHRIGAVS HE
|
|---|
| |