Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2063 |
Symbol | |
ID | 5356125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2103437 |
End bp | 2106301 |
Gene Length | 2865 bp |
Protein Length | 954 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640811116 |
Product | autotransporter beta-domain-containing protein |
Protein accession | YP_001347436 |
Protein GI | 152986100 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.217829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGCTGG GCGTTTCGCT GTCGCTGTCG CCTTGTGCGC TGGCCGAAAT GCGGCCCAGC GGTTGGGAGC AGGACTTCAT CGGCGTAGCG GAAGCACGCG GGCTGGGATT GACCGGCAAG GGCGTGGATG TCGGGGTGAT CGACGGCGGG TTCCTTCCCG GTCACCCGGC TTTCGCCGGC CAGGCGATCT CTGCGCTGGC CAGCCGAGTG GTCATCGACG GCGAGGAAGT GCTCGCCGAT CCCATGCAGC CGCTCTTCGA ACGCGATGAG CAGAGCGGCG AAATACGGGT CGCCAGTCAT GGCGCGAATG TCAGCGGAAT CATCGCGGCC AGGGCGGAGA CCATCGGCGA TTTCAACTAC CGCGGCGGCG TGGCGCCGCA GGTCAGGCTT TTCCAGGCGC AGTCGGATCC CAGCGAGGAC ATCGATGACG AGGGCGCCGA CACAGGGGAA GAACCAGGCG CAGAGGCGAG CCCGTCCAGC CTGCTGCAAC CGGGCAGCGA GGACCTCTTC CATGGCGCCC TGACCACCCT CTACCGGAGC GCGCCGAGGT TGCGGGTCAT CAACAACAGC TACAACGACG ATCCAATCGG CAATGACGCC GAGGCGGTGG ATGCCGCCTA TGCGGCGATC GATCCCGCGG CCCCGCATCC GTACCTGGGG GCCTTGGCCG ACGGTGTGCA CGAAGGGCGT CTGCTGGTGT TCGCGGCCGG CAACGAAAGC ATCGCGCAGC CCGGCCTGCT CGCCACCTTG CCGCGCTTCA TGCCCGAGCT GGAAAAGGGT TTCCTCAGCG TGGTCGCGCT GGGGCCGGAC CGCGACCTCA CCGACTATTC CAACCAGTGC GGGGTGACGC AGGAGTGGTG CCTGGCGGCG CCCGGCGACA TGTACGTGGC CACGGCGAGC GGCTCCTCGG CCGAGGGCCT GACCTACCTC TATGACGACG AGAGCGGTAC TTCCTACGCT GCGCCCCTGG TCAGCGCCAG CGCGGCGTTG CTGGCCGAGC GCTTTCCCTA CATGGACATG GCGCAGGTAC GCATGACTCT GCTGAGCACC GCTACCGATC TCGGCGAGCC CGGGGTCGAC GCGCGTTTCG GCTGGGGCCT GCTGGACCTG GCCCGGGCGG TGCGGGGGCC GGGCCAACTG TTCGGCGACC AGCGGGTGAC GCTGGACGCC GCCCGGGGCG GCTGGAACGC CAGGGATGTC TGGAGCAACG CTATCAGCGC CGGCGGCGTG CTCGCCAAGT CCGGCAGCGG CGCGCTGTTG CTGGCGGGCG ACAATCGTTT CGCCGGGGTC GCGGTCGAGG AGGGCGAACT GGCCCTCGGC GGACGCAATC GCTTCTCCGC TGCCAGCGAG GTACGTGGCG GGCGCCTGGT GGTGGACGGC ATCCTCGAAG GACCGCGGCT GAGCGTGGGT CGGGCCGGCG AATTGAGCGG TGGCGGCACC GTCGCCGCGC CAACCCGGAT CGACGGTGTG CTCGTCGCCG ACCGCGCGCC GGGCTTCACT CGCTCCCTGG AGCTGTCGCC ATCCAGCACC ACCCGGGTGG CCCTGGAAGG ACAGCCGCCG ATCCGTCTCG ACGGCGCAGG CGCTTTCGCA CGGTTGGGCG GGCGGCTGCA ACTGACGACG GCCGATACCG CGGTGGGGGC GGAACAGAAG CTCCTGGCGG TCGCCCCGGG CGCCACCTAC GTGGGCGGTT TCGCGGCCCT GCAGCAGGCG CCGGGCCTCG CCGAAAAAGG TTTGCGCCAC GACCTGCGCT TCACCGCGGA CGGCATCTCC CTCGCCCTGG CTCCGCTCGT CCTGCCCGGG CAGGCTGGGC TGCCGGGCAA CGCCGGACGT ACCGCGGCGG CGCTGAACGC TCTGCGCGAC CAGCCCATCG CCCTGCGTGC CGGCGCCTAC AACTCCTGGC TGCAAGCCAG CCTGTCTCGC GGCGACCTGG GTGGCTTGCA GCGTGGCGCC GGCGGCCAGG TGTACGCCGA CAGCCTGGCG TACCTGAGCC GCCAGCCTGC ACGGGTGGAC CGCGCGATGT TCGGCGAACT GTCCCGGGCG CAGTCCGGCC AGGCACCGCG CTTGTGGTTC CAGGGACTCG CCGCCGGCCA GCGCAACCAG GGACGCGCGG GCGTCGCCGG TAGCCGCGAG CGCAGCGACG GGCTCGCCCT GGGCATGGTC CAGGCGTTCG GCGAACGTAC CCGGGGCGGC GCGACGCTGG CGCAGACCAA GGGCCGGGTC GGCAGCGCCG GCGGCAAGGT CGAGCTGGAC ATCACCCAGC TCGCCGTGGG CTTGCTACAC GCCTTCGACA GCCTGGAACA GGGCGGTTAC GTCAGTGCCA TGCTCGGCGC CGGCTACCTC GACGCCGCCA GCAAGCGGCG CCTGCCGGGC TTTGCCACGG CCAAGGGCGA CAGCGAGGGC TGGCTCTACC ACGCCAGCGT CAAGAGCGGC TACCGCTGGC GCAAGGACGA TTGGTGGGTC GAGCCGCGGG TCGGCCTGCT GGCGACCCGC ACGGAATGGA AAGGTTTCCG CGAAAAGCAC AGCGAACTCG CGCTCGACGT CGATCGCGCA GCCCGAGGGG CGAGCTTCGG TACATTGGAA ATGAGCGTCG CGCGCAGTCT GCGCCTGGGC GACTGGTCGG TGGAACCGGA GCTGGACCTG GGCTACGAAC GCGCCCTGCG AGCGCCGGCA AGCCATGGCG ATGCGAGACT GCAAGGCATC GCCCTGAAGC AGGTCTCGGC CAGCCGGGCG CGCGACCTGT TCCGCGCGGG CCTGGCGCTG CATGCCCGTC GCGGTCCTTT GCTGGGCAGT CTGGAATTGC AGGGAGCGAA GGGCGAGCGG GTCGCCAGCA GCGCCGTCAA CCTGCGATTG AGCTACGACT TCTAG
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Protein sequence | MPLGVSLSLS PCALAEMRPS GWEQDFIGVA EARGLGLTGK GVDVGVIDGG FLPGHPAFAG QAISALASRV VIDGEEVLAD PMQPLFERDE QSGEIRVASH GANVSGIIAA RAETIGDFNY RGGVAPQVRL FQAQSDPSED IDDEGADTGE EPGAEASPSS LLQPGSEDLF HGALTTLYRS APRLRVINNS YNDDPIGNDA EAVDAAYAAI DPAAPHPYLG ALADGVHEGR LLVFAAGNES IAQPGLLATL PRFMPELEKG FLSVVALGPD RDLTDYSNQC GVTQEWCLAA PGDMYVATAS GSSAEGLTYL YDDESGTSYA APLVSASAAL LAERFPYMDM AQVRMTLLST ATDLGEPGVD ARFGWGLLDL ARAVRGPGQL FGDQRVTLDA ARGGWNARDV WSNAISAGGV LAKSGSGALL LAGDNRFAGV AVEEGELALG GRNRFSAASE VRGGRLVVDG ILEGPRLSVG RAGELSGGGT VAAPTRIDGV LVADRAPGFT RSLELSPSST TRVALEGQPP IRLDGAGAFA RLGGRLQLTT ADTAVGAEQK LLAVAPGATY VGGFAALQQA PGLAEKGLRH DLRFTADGIS LALAPLVLPG QAGLPGNAGR TAAALNALRD QPIALRAGAY NSWLQASLSR GDLGGLQRGA GGQVYADSLA YLSRQPARVD RAMFGELSRA QSGQAPRLWF QGLAAGQRNQ GRAGVAGSRE RSDGLALGMV QAFGERTRGG ATLAQTKGRV GSAGGKVELD ITQLAVGLLH AFDSLEQGGY VSAMLGAGYL DAASKRRLPG FATAKGDSEG WLYHASVKSG YRWRKDDWWV EPRVGLLATR TEWKGFREKH SELALDVDRA ARGASFGTLE MSVARSLRLG DWSVEPELDL GYERALRAPA SHGDARLQGI ALKQVSASRA RDLFRAGLAL HARRGPLLGS LELQGAKGER VASSAVNLRL SYDF
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