Gene PSPA7_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_2063 
Symbol 
ID5356125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp2103437 
End bp2106301 
Gene Length2865 bp 
Protein Length954 aa 
Translation table11 
GC content70% 
IMG OID640811116 
Productautotransporter beta-domain-containing protein 
Protein accessionYP_001347436 
Protein GI152986100 
COG category[S] Function unknown 
COG ID[COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain 
TIGRFAM ID[TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.217829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCTGG GCGTTTCGCT GTCGCTGTCG CCTTGTGCGC TGGCCGAAAT GCGGCCCAGC 
GGTTGGGAGC AGGACTTCAT CGGCGTAGCG GAAGCACGCG GGCTGGGATT GACCGGCAAG
GGCGTGGATG TCGGGGTGAT CGACGGCGGG TTCCTTCCCG GTCACCCGGC TTTCGCCGGC
CAGGCGATCT CTGCGCTGGC CAGCCGAGTG GTCATCGACG GCGAGGAAGT GCTCGCCGAT
CCCATGCAGC CGCTCTTCGA ACGCGATGAG CAGAGCGGCG AAATACGGGT CGCCAGTCAT
GGCGCGAATG TCAGCGGAAT CATCGCGGCC AGGGCGGAGA CCATCGGCGA TTTCAACTAC
CGCGGCGGCG TGGCGCCGCA GGTCAGGCTT TTCCAGGCGC AGTCGGATCC CAGCGAGGAC
ATCGATGACG AGGGCGCCGA CACAGGGGAA GAACCAGGCG CAGAGGCGAG CCCGTCCAGC
CTGCTGCAAC CGGGCAGCGA GGACCTCTTC CATGGCGCCC TGACCACCCT CTACCGGAGC
GCGCCGAGGT TGCGGGTCAT CAACAACAGC TACAACGACG ATCCAATCGG CAATGACGCC
GAGGCGGTGG ATGCCGCCTA TGCGGCGATC GATCCCGCGG CCCCGCATCC GTACCTGGGG
GCCTTGGCCG ACGGTGTGCA CGAAGGGCGT CTGCTGGTGT TCGCGGCCGG CAACGAAAGC
ATCGCGCAGC CCGGCCTGCT CGCCACCTTG CCGCGCTTCA TGCCCGAGCT GGAAAAGGGT
TTCCTCAGCG TGGTCGCGCT GGGGCCGGAC CGCGACCTCA CCGACTATTC CAACCAGTGC
GGGGTGACGC AGGAGTGGTG CCTGGCGGCG CCCGGCGACA TGTACGTGGC CACGGCGAGC
GGCTCCTCGG CCGAGGGCCT GACCTACCTC TATGACGACG AGAGCGGTAC TTCCTACGCT
GCGCCCCTGG TCAGCGCCAG CGCGGCGTTG CTGGCCGAGC GCTTTCCCTA CATGGACATG
GCGCAGGTAC GCATGACTCT GCTGAGCACC GCTACCGATC TCGGCGAGCC CGGGGTCGAC
GCGCGTTTCG GCTGGGGCCT GCTGGACCTG GCCCGGGCGG TGCGGGGGCC GGGCCAACTG
TTCGGCGACC AGCGGGTGAC GCTGGACGCC GCCCGGGGCG GCTGGAACGC CAGGGATGTC
TGGAGCAACG CTATCAGCGC CGGCGGCGTG CTCGCCAAGT CCGGCAGCGG CGCGCTGTTG
CTGGCGGGCG ACAATCGTTT CGCCGGGGTC GCGGTCGAGG AGGGCGAACT GGCCCTCGGC
GGACGCAATC GCTTCTCCGC TGCCAGCGAG GTACGTGGCG GGCGCCTGGT GGTGGACGGC
ATCCTCGAAG GACCGCGGCT GAGCGTGGGT CGGGCCGGCG AATTGAGCGG TGGCGGCACC
GTCGCCGCGC CAACCCGGAT CGACGGTGTG CTCGTCGCCG ACCGCGCGCC GGGCTTCACT
CGCTCCCTGG AGCTGTCGCC ATCCAGCACC ACCCGGGTGG CCCTGGAAGG ACAGCCGCCG
ATCCGTCTCG ACGGCGCAGG CGCTTTCGCA CGGTTGGGCG GGCGGCTGCA ACTGACGACG
GCCGATACCG CGGTGGGGGC GGAACAGAAG CTCCTGGCGG TCGCCCCGGG CGCCACCTAC
GTGGGCGGTT TCGCGGCCCT GCAGCAGGCG CCGGGCCTCG CCGAAAAAGG TTTGCGCCAC
GACCTGCGCT TCACCGCGGA CGGCATCTCC CTCGCCCTGG CTCCGCTCGT CCTGCCCGGG
CAGGCTGGGC TGCCGGGCAA CGCCGGACGT ACCGCGGCGG CGCTGAACGC TCTGCGCGAC
CAGCCCATCG CCCTGCGTGC CGGCGCCTAC AACTCCTGGC TGCAAGCCAG CCTGTCTCGC
GGCGACCTGG GTGGCTTGCA GCGTGGCGCC GGCGGCCAGG TGTACGCCGA CAGCCTGGCG
TACCTGAGCC GCCAGCCTGC ACGGGTGGAC CGCGCGATGT TCGGCGAACT GTCCCGGGCG
CAGTCCGGCC AGGCACCGCG CTTGTGGTTC CAGGGACTCG CCGCCGGCCA GCGCAACCAG
GGACGCGCGG GCGTCGCCGG TAGCCGCGAG CGCAGCGACG GGCTCGCCCT GGGCATGGTC
CAGGCGTTCG GCGAACGTAC CCGGGGCGGC GCGACGCTGG CGCAGACCAA GGGCCGGGTC
GGCAGCGCCG GCGGCAAGGT CGAGCTGGAC ATCACCCAGC TCGCCGTGGG CTTGCTACAC
GCCTTCGACA GCCTGGAACA GGGCGGTTAC GTCAGTGCCA TGCTCGGCGC CGGCTACCTC
GACGCCGCCA GCAAGCGGCG CCTGCCGGGC TTTGCCACGG CCAAGGGCGA CAGCGAGGGC
TGGCTCTACC ACGCCAGCGT CAAGAGCGGC TACCGCTGGC GCAAGGACGA TTGGTGGGTC
GAGCCGCGGG TCGGCCTGCT GGCGACCCGC ACGGAATGGA AAGGTTTCCG CGAAAAGCAC
AGCGAACTCG CGCTCGACGT CGATCGCGCA GCCCGAGGGG CGAGCTTCGG TACATTGGAA
ATGAGCGTCG CGCGCAGTCT GCGCCTGGGC GACTGGTCGG TGGAACCGGA GCTGGACCTG
GGCTACGAAC GCGCCCTGCG AGCGCCGGCA AGCCATGGCG ATGCGAGACT GCAAGGCATC
GCCCTGAAGC AGGTCTCGGC CAGCCGGGCG CGCGACCTGT TCCGCGCGGG CCTGGCGCTG
CATGCCCGTC GCGGTCCTTT GCTGGGCAGT CTGGAATTGC AGGGAGCGAA GGGCGAGCGG
GTCGCCAGCA GCGCCGTCAA CCTGCGATTG AGCTACGACT TCTAG
 
Protein sequence
MPLGVSLSLS PCALAEMRPS GWEQDFIGVA EARGLGLTGK GVDVGVIDGG FLPGHPAFAG 
QAISALASRV VIDGEEVLAD PMQPLFERDE QSGEIRVASH GANVSGIIAA RAETIGDFNY
RGGVAPQVRL FQAQSDPSED IDDEGADTGE EPGAEASPSS LLQPGSEDLF HGALTTLYRS
APRLRVINNS YNDDPIGNDA EAVDAAYAAI DPAAPHPYLG ALADGVHEGR LLVFAAGNES
IAQPGLLATL PRFMPELEKG FLSVVALGPD RDLTDYSNQC GVTQEWCLAA PGDMYVATAS
GSSAEGLTYL YDDESGTSYA APLVSASAAL LAERFPYMDM AQVRMTLLST ATDLGEPGVD
ARFGWGLLDL ARAVRGPGQL FGDQRVTLDA ARGGWNARDV WSNAISAGGV LAKSGSGALL
LAGDNRFAGV AVEEGELALG GRNRFSAASE VRGGRLVVDG ILEGPRLSVG RAGELSGGGT
VAAPTRIDGV LVADRAPGFT RSLELSPSST TRVALEGQPP IRLDGAGAFA RLGGRLQLTT
ADTAVGAEQK LLAVAPGATY VGGFAALQQA PGLAEKGLRH DLRFTADGIS LALAPLVLPG
QAGLPGNAGR TAAALNALRD QPIALRAGAY NSWLQASLSR GDLGGLQRGA GGQVYADSLA
YLSRQPARVD RAMFGELSRA QSGQAPRLWF QGLAAGQRNQ GRAGVAGSRE RSDGLALGMV
QAFGERTRGG ATLAQTKGRV GSAGGKVELD ITQLAVGLLH AFDSLEQGGY VSAMLGAGYL
DAASKRRLPG FATAKGDSEG WLYHASVKSG YRWRKDDWWV EPRVGLLATR TEWKGFREKH
SELALDVDRA ARGASFGTLE MSVARSLRLG DWSVEPELDL GYERALRAPA SHGDARLQGI
ALKQVSASRA RDLFRAGLAL HARRGPLLGS LELQGAKGER VASSAVNLRL SYDF