Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2042 |
Symbol | |
ID | 5359795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2078635 |
End bp | 2079657 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640811095 |
Product | putative transcriptional regulator |
Protein accession | YP_001347415 |
Protein GI | 152985183 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.736805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCCTCG GCGACCTCTC GGTCGGCTTC GTCCAGGCCC TGGCCGATGC CCTGCTCGCC GCCGGCGTCG ATCCCGCAGC GCTGCTCGAG CAGTACGGCC TCGACCAGCG GCGCCTGGCC GAACCCGGCG CGCGCCTGTC GATTCCCCGC TACATGCGCC TGGGCCACGC CGCCATCCAG CTCAGCGGCG ACCCCGCCCT GGGGCTGCAG ATGGGCCGCC TGAGCCGTCT CGGACAGATG GGCCTGGCCG GGGTCAGCGT GGCCCAGGCG CCGAACCTGC GCGCCGCGGC GCGGGCGATG ATCCACCTGG AACCGCTCTA CGCGCAGAAC TACCGCGGTC AGTCGAGCCT GGTGGAAGAC GCCGGCGGCG CCTGGTTGCG CTTCTATTCG ATCAGCCCCT ACAACGCCTA CAACCGCTTC GTCGTCGATT CGGTACTGGC CGGCTGGATC AGCCATCTCG GCGCCCTGGC CGGGCAGCCG CTGAAACCCG AACGGGTGGA AATCGAGTAT CCGGCGCCGG CCTGGGCCGA CCGCTACGAG GCGTTCTTCG GCTGCCCGGT GGCGTTCGGC GCGCCGACCA ACCAGTTGCA CCTGAGCCAG GCCAGCCTGG CCCTGGGCAA TGCAGAGCAC TGCCCGAGCA CCTGGAACCA GATGCTGGAG ATCTGCAATC GCGAACTGGA ACAACTGACC CGCACCCGCA GTTGGCGCGA GCGCGTCAGT CGCCTGCTGG GGCCACTGCT CAACGGCCGC GAGCCGGACC TGGAGGAAGT CGCCACGCGC CTCAAGCTGC CGACCTGGAC CCTGCGGCGC AAGCTGGCCG AGGAAGGCAC GCAGTACCGC AGCATCCTCA ACGAGACCCG CCGCGACCTG GCGATGGTCT ACATCCGCGA GACCGACCTG GCCTTCGGCG AGATCGCCTA CCTGCTCGGC TTCGCCTCGG CGGAAGCCTT CCAGCGCGCC TTCAAGCGCT GGAGCGGGCA GACTCCCGGC GAGTTCCGCC GCGCCCAGCG GCAGAACGCC TGA
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Protein sequence | MRLGDLSVGF VQALADALLA AGVDPAALLE QYGLDQRRLA EPGARLSIPR YMRLGHAAIQ LSGDPALGLQ MGRLSRLGQM GLAGVSVAQA PNLRAAARAM IHLEPLYAQN YRGQSSLVED AGGAWLRFYS ISPYNAYNRF VVDSVLAGWI SHLGALAGQP LKPERVEIEY PAPAWADRYE AFFGCPVAFG APTNQLHLSQ ASLALGNAEH CPSTWNQMLE ICNRELEQLT RTRSWRERVS RLLGPLLNGR EPDLEEVATR LKLPTWTLRR KLAEEGTQYR SILNETRRDL AMVYIRETDL AFGEIAYLLG FASAEAFQRA FKRWSGQTPG EFRRAQRQNA
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