Gene PSPA7_2033 details

Gene Information

• Locus tag: PSPA7_2033
• Symbol: gspH2
• ID: 5354980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 2073576
• End bp: 2074094
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640811086
• Product: general secretion pathway protein H
• Protein accession: YP_001347409
• Protein GI: 152987769
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01708] general secretion pathway protein H; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGAAT CGCGCGGCTT CACCCTCATC GAGCTGATGG TGGTGATGGT CATCATCAGC 
GTGCTGATCG GCCTGGCGGT GCTCAGCACC GGCTTCGCCA GCACCTCGCG GGAGCTGGAC 
AGCGAGGCCG AGCGGCTCGC CGGGCTGATC GGCGTGCTGA CCGACGAGGC CGTGCTGGAC 
AACCGCGAAT ACGGCCTGCG CCTGGAGCGC GACGCCTACC AGGTGCTGCG CTATGACGAA 
GCGAAGGCGC GCTGGCTGCC GGTGGCGCGC GACAGCCATC GCCTGCCGGA ATGGGCCGAG 
CTGACCTTCG AGCTGGACGG CCAGCCGCTG GTGCTGGCCG GCGGCAAGGG CGAGAAGGAA 
CAGAAGAAAG GCACCGACCA GCCGCAATTG CTGATCCTCT CCAGCGGCGA ACTCAGCCCG 
TTCCGCCTGC GTCTGGCCGA GCGCGGACCC GAAGGCCGCG CGCTGTCGCT GAGCAGCGAC 
GGTTTCCGCT TGCCGCGGGT CGAGGTGGCG CGGCGATGA 

 

Protein sequence

MRESRGFTLI ELMVVMVIIS VLIGLAVLST GFASTSRELD SEAERLAGLI GVLTDEAVLD 
NREYGLRLER DAYQVLRYDE AKARWLPVAR DSHRLPEWAE LTFELDGQPL VLAGGKGEKE 
QKKGTDQPQL LILSSGELSP FRLRLAERGP EGRALSLSSD GFRLPRVEVA RR