| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2027 |
|---|
| Symbol | |
|---|
| ID | 5353932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2066631 |
|---|
| End bp | 2067398 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640811080 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_001347403 |
|---|
| Protein GI | 152987885 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.274157 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAG GCAACCTGCG AGGCAACGGC AAGGTCGCGC TGGTCACCGG GGCGGCCCGT
GGCATCGGCC TGGGCATCAG CGCCTGGCTG ATCGCCGAGG GCTGGCAGGT GGTGCTCGCC
GACAATGACC GCGAACGTGG CGCCAGGGTC GCCGAGGCGC TCGGTGAGCA GGCCTGGTTC
GTCGCCATGG ACGTGGCCCA GGAGAGCCAG GTGGCGATGA GCGTGGCCGA GGTGCTCGGC
CAGTTCGGTC GCCTGGACGC GCTGGTGTGC AACGCCGCCA TCGCCAATCC GCGCAATACC
CCGCTGGAGG CGCTGACCCT CGGCGAATGG ACCCGTACCC TGGCGGTCAA TCTGAACGGC
CCGATGCTGC TGGCCAAATA CTGCACGCCC TACCTGCGCG CGCACAGCGG CGCCATCGTC
AACATCGCCT CCACCCGCGC CCACCAGTCA GAGCCCGATT CCGAAGCCTA CGCGGCGAGC
AAGGGCGGGT TGCTGGCGCT GACCCACGCG CTGGCCGCCA GCCTCGGCCC TGAAATCCGC
GTCAACGCGG TCAGCCCCGG CTGGATCGAT ACCCGCGACG TGGCCGAACG CGAGGCCGCG
CCGCTGACCG AGCTGGACCA CGACCAGCAC CCGGTCGGCC GGGTCGGCAG CGTCGAGGAC
GTGGCCTCGC TGGTGGCCTG GCTGCTGTCC GAGGACGCCG GCTTCGTCAC CGGCCAGGAG
TTCCTGGTCG ACGGCGGCAT GACGCGGAAG ATGATCTACC TCGACTGA
|
|---|
| Protein sequence | MNEGNLRGNG KVALVTGAAR GIGLGISAWL IAEGWQVVLA DNDRERGARV AEALGEQAWF
VAMDVAQESQ VAMSVAEVLG QFGRLDALVC NAAIANPRNT PLEALTLGEW TRTLAVNLNG
PMLLAKYCTP YLRAHSGAIV NIASTRAHQS EPDSEAYAAS KGGLLALTHA LAASLGPEIR
VNAVSPGWID TRDVAEREAA PLTELDHDQH PVGRVGSVED VASLVAWLLS EDAGFVTGQE
FLVDGGMTRK MIYLD
|
|---|
| |