Gene PSPA7_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_2012 
SymbolleuC 
ID5357408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp2049113 
End bp2050537 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content68% 
IMG OID640811065 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_001347388 
Protein GI152988050 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0300931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCA AGACCCTCTA CGACAAACTC TGGGACATGC ACCTGGTCAA GCAGCGCGAC 
GACGGCTCGG CGCTGATCTA CATCGACCGC CATATCCTGC ACGAAGTGAC CTCGCCGCAG
GCCTTCGAGG GTCTCCGCCT GGCCGGGCGC AAGCCGTGGC GGATCGACGC CAACATCGCC
ACCCCGGACC ACAACGTGCC GACCACCCGC ACCGAGCGCA AGGGCGGCCT CGCCGCCATC
GCCGACGAAG TCTCGCGCCT GCAGGTACAG ACCCTCGACG AGAACTGCGA CGACTTCGGC
ATCACCGAAT TCAAGATGAA CGACGTGCGC CAGGGCATCG TCCACGTGGT CGGCCCGGAG
CAGGGCGCGA CCCTGCCGGG GATGACCGTG GTCTGCGGCG ACTCGCACAC CTCCACCCAT
GGCGCCTTCG GCGCGCTGGC CCATGGCATC GGCACCTCCG AGGTCGAGCA CGTGCTGGCG
ACCCAGTGCC TGGTGGCGAA GAAGATGAAG AACATGCTGG TCAAGGTCGA AGGCAAGCTG
CCGGCCGGGG TCACGGCGAA GGATATCGTC CTCGCGGTGA TCGGCAGGAT CGGCACTGCC
GGCGGCAACG GCCACGCCAT CGAGTTCGCC GGCAGCGCCA TCCGCGACCT GTCCATCGAA
GGGCGGATGA CCATCTGCAA CATGTCGATC GAGGCGGGCG CCCGCGTCGG CCTGGTCGCT
GTCGACCAGA AGACCATCGA CTACGTGAAG GGCCGCCCGT TCGCGCCGAG CGCCGAGCAG
TGGGAACAGG CCGTGGCCTG CTGGCAGGGT CTGGTGTCGG ACGCCGACGC CCGTTTCGAT
ACCGTGGTCG AGCTGGACGC CGCGCAGATC AAGCCGCAGG TCAGCTGGGG CACCTCGCCG
GAGATGGTCC TGGCGGTCGA CCAGAACGTG CCCGACCCGG CCCGCGAGAG CGACCCGATC
AAGCGTGGCT CGATCGAGCG CGCCCTGAAG TACATGGGGT TGCAGCCGAA CCAGGCGATC
ACCGACATCC AGCTCGACCG GGTGTTCATC GGTTCCTGCA CCAACTCGCG GATCGAGGAC
CTGCGCGCCG CCGCCGAAGT GGCCAGGGGC CGCAAGGTCG CCGCGACCAT CAAGCAGGCG
CTGGTGGTGC CGGGCTCCGG CCTGGTCAAG GAGCAGGCCG AGAAAGAAGG CCTGGACCGG
ATCTTCATCG AGGCCGGCTT CGAATGGCGC GAGCCGGGCT GCTCCATGTG CCTGGCGATG
AACCCGGACC GGCTGGAGAG CGGCGAACAC TGCGCGTCGA CCTCCAACCG CAACTTCGAG
GGCCGCCAGG GCGCCGGTGG CCGCACTCAC CTGGTCAGCC CGGCGATGGC CGCCGCCGCG
GCCGTCAACG GCCGCTTCAT CGATGTCCGC GAATTGCTCG CCTGA
 
Protein sequence
MAGKTLYDKL WDMHLVKQRD DGSALIYIDR HILHEVTSPQ AFEGLRLAGR KPWRIDANIA 
TPDHNVPTTR TERKGGLAAI ADEVSRLQVQ TLDENCDDFG ITEFKMNDVR QGIVHVVGPE
QGATLPGMTV VCGDSHTSTH GAFGALAHGI GTSEVEHVLA TQCLVAKKMK NMLVKVEGKL
PAGVTAKDIV LAVIGRIGTA GGNGHAIEFA GSAIRDLSIE GRMTICNMSI EAGARVGLVA
VDQKTIDYVK GRPFAPSAEQ WEQAVACWQG LVSDADARFD TVVELDAAQI KPQVSWGTSP
EMVLAVDQNV PDPARESDPI KRGSIERALK YMGLQPNQAI TDIQLDRVFI GSCTNSRIED
LRAAAEVARG RKVAATIKQA LVVPGSGLVK EQAEKEGLDR IFIEAGFEWR EPGCSMCLAM
NPDRLESGEH CASTSNRNFE GRQGAGGRTH LVSPAMAAAA AVNGRFIDVR ELLA