| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2011 |
|---|
| Symbol | |
|---|
| ID | 5354991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2048057 |
|---|
| End bp | 2048950 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640811064 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001347387 |
|---|
| Protein GI | 152987965 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.174937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA ACAGCCTCGA CACCTTCATA GCCATTGCCG AAACCGGCAG CTTCTCCGAA
GCCGGCGAGC GCCTGCACCT GACCCAACCG GCGGTGAGCA AGCGCATCGC CGCCCTGGAA
CAGCAGCTCA ACGCCCGCCT GTTCGACCGG GTCGGCCGCG AGGTCAATCT CACCGAGGCT
GGCCGCGCCC TGCTGCCGCG CGCCTACCAG TTGCTCAACG TGCTCGACGA CACCCGCCGC
GCGTTGAACA ACCTCACCGG CGAGGTCAGC GGCCGCCTGG TCCTGGCCAC CAGCCATCAC
ATCGGCCTGC ACCGCCTGCC GCCGCTGCTG CGCGCCTTCA CCCGGGCGCA TCCGCAGGTG
GCGCTGGACA TCCAGTTTCT CGATTCGGAA GTGGCCTACG AGGAAATCCT GCACGGCCGT
GCGGAACTGG CGGTGATCAC CCTGGCACCG GAAACCGCCC AACCGGTGCA CGCGGTACCG
GTGTGGGACG ACCCGCTGGA CTTCGTCGCC GCCCCGGAGC ATCCGCTGGC CCGCCAGGGC
ACGGTGTTCC TCGCCGACGT CGCCAAGCAC CCGGCGGTGT TCCCCGGCGG CAACACCTTC
ACCCACCATA TCGTGCGGCG CATGTTCGAG GCCGAGGGGC TGACGCCGAA CATCGCCATG
AGCACCAACT ACCTGGAGAC CATCAAGATG ATGGTCTCCA TCGGCCTGGC CTGGAGCGTG
CTGCCGCGGA CCATGCTCGA CGACCAGGTG GTGCGCCTGC CGTTGCAGGA TATCCAGCTC
AGCCGCCAGC TCGGCTACAT CCTGCACACC GAGCGGACCC TGTCGAATGC CGCGCGGGCC
TTCATGCGCC TGCTCGACGA ACAGGCGCTG GCCGCCCCGC CGCTACGCCC CTGA
|
|---|
| Protein sequence | MDLNSLDTFI AIAETGSFSE AGERLHLTQP AVSKRIAALE QQLNARLFDR VGREVNLTEA
GRALLPRAYQ LLNVLDDTRR ALNNLTGEVS GRLVLATSHH IGLHRLPPLL RAFTRAHPQV
ALDIQFLDSE VAYEEILHGR AELAVITLAP ETAQPVHAVP VWDDPLDFVA APEHPLARQG
TVFLADVAKH PAVFPGGNTF THHIVRRMFE AEGLTPNIAM STNYLETIKM MVSIGLAWSV
LPRTMLDDQV VRLPLQDIQL SRQLGYILHT ERTLSNAARA FMRLLDEQAL AAPPLRP
|
|---|
| |