Gene PSPA7_2001 details

Gene Information

• Locus tag: PSPA7_2001
• ID: 5354562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 2040257
• End bp: 2040904
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640811054
• Product: putative aldolase
• Protein accession: YP_001347377
• Protein GI: 152989296
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase
• TIGRFAM ID: [TIGR01182] Entner-Doudoroff aldolase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.95753
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTGC CGCTGGATCG GGTCCTGCTA CAGGCCAGCC CGGTATTGCC GGTGCTGGTG 
ATCGAGGACG TGGCGCTGGC GCCCGACCTG GCGCGCGCGT TGTATGCGGG TGGCGTCACG 
GTGCTGGAAG TGACGCTGCG CACGCCGCAG GCGCTGGACG CGATCGCCGC CATCCATCGC 
GAGGTGCCCG AAGTCCTGCT GGGGGCGGGT ACCCTGATCC ACACCGAGCA GTTCCTCGAG 
GCGCGCGACG CGGGCGCACA GTTCGCCGTC AGTCCCGGAT GCACGCCGCG CCTTGCCGCC 
GCCGCCGAGG ATGCCGGCCT GCCATACCTG CCCGGGGTGA TGACACCTTC GGAAGTGTTG 
CTGGCGCTGG AGTACGGTTA TCGCTCGCTG AAGCTGTTTC CGGCCGATGG CACTGCCAGT 
GTGAAAATGC TGAAAAGCCT GAAGGGGCCG TTCACCGGTA TTCGCTTCTG CCCGACCGGC 
GGGGTGAACC TGGACAACCT GCTGAATTTC CTGCGCCTGC CCAACGTCGC CTGCGTCGGC 
GGCACCTGGC TGGCGCCCCC CAGTCTGATC CGGGCGCGCG CCTGGGACCA GATCACCCAA 
CTGGCCAGGG AAGCGCGCGA CCTGGCCGGC AGCCTGGAGC CGCATTGA 

 

Protein sequence

MTLPLDRVLL QASPVLPVLV IEDVALAPDL ARALYAGGVT VLEVTLRTPQ ALDAIAAIHR 
EVPEVLLGAG TLIHTEQFLE ARDAGAQFAV SPGCTPRLAA AAEDAGLPYL PGVMTPSEVL 
LALEYGYRSL KLFPADGTAS VKMLKSLKGP FTGIRFCPTG GVNLDNLLNF LRLPNVACVG 
GTWLAPPSLI RARAWDQITQ LAREARDLAG SLEPH