| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1957 |
|---|
| Symbol | gph2 |
|---|
| ID | 5355661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1987265 |
|---|
| End bp | 1987936 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640811010 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_001347338 |
|---|
| Protein GI | 152988696 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.833111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTCA AAGCGGTACT GTTCGACATG GATGGCACCC TGCTCGACAC GGCGCCGGAC
TTCATCGCCA TCACCCAGGC CATGCGTGCC GCCCACGGCC TGCCGCCGGT GGACGAGCAA
CGGGTGCGCG ACGTGGTCTC CGGCGGCGCG CGCGCGATGG TTGCCGCGGC CTTCGGCCTG
TCGCTGGACA GCCCGGAGCT GGAACCGCTG CGCCAGGAGT TCCTCGAGCG CTACCAGGAG
CATTGCGCGG TTCTCAGCCG GCCCTACGAC GGCATTCCCG AGTTGCTCGC GGCGATCGAG
AAGGCTGGAC TGATCTGGGG CGTGGTGACC AACAAGCCGG TGCGCTTCGC CGAGCCGATC
ATGCGGCGCC TGGGCTATGC CGAGCGCTCG AAGGTGCTGG TCTGCCCGGA CCACGTGAGC
CGCAGCAAGC CCGACCCCGA GCCGCTGCTG CTGGCCTGCA GCCAGCTCGG CATCGACCCG
TCGGGCGTGC TGTTCATCGG CGACGACCTG CGCGACATCG AGTCCGGCCG CGATGCCGGG
ACCAAGACCG CGGCGGTGCG CTACGGCTAC ATCCACCCCG AAGACAACCC CGCGCACTGG
GGCGCCGACG TGATAGTCGA CCACCCGCGC GAGCTGATCG AGGTTCTCGA CCGCGCGCTC
TGCGATTGCT GA
|
|---|
| Protein sequence | MRLKAVLFDM DGTLLDTAPD FIAITQAMRA AHGLPPVDEQ RVRDVVSGGA RAMVAAAFGL
SLDSPELEPL RQEFLERYQE HCAVLSRPYD GIPELLAAIE KAGLIWGVVT NKPVRFAEPI
MRRLGYAERS KVLVCPDHVS RSKPDPEPLL LACSQLGIDP SGVLFIGDDL RDIESGRDAG
TKTAAVRYGY IHPEDNPAHW GADVIVDHPR ELIEVLDRAL CDC
|
|---|
| |