Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1953 |
Symbol | gltS |
ID | 5355430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1983355 |
End bp | 1984569 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640811006 |
Product | sodium/glutamate symporter |
Protein accession | YP_001347334 |
Protein GI | 152986604 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00992782 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGACAA TGCACCTGGA CGCCCTGTCC ACCACCGCCC TCGCCCTGCT CTTGCTCGCC ATCGGCAGCC AGCTGAAGAA ACGCAGCCGC TGGCTGACCC GTCTCTGCGT GCCCTCGCCG GTGATCGCCG GCTTCGGCTT CGCCTTCCTG GTCTGGCTGC TCAGGGACCG CGGCTGGCTC GACATCGGCC TCGACACCAG CCTGCAGACA CCCCTGATGG TGGCCTTCTT CACCACCGTC GGTCTCGGTG GCAGCCTCGG TCTGCTGCGC AAGGGCGGCA AGACCCTGCT GGTCTACCTG GCGGCATGCT GGGCGCTGGC GATCCTGCAG AACCTGATCG GCGTCGGCAG CGCCGGACTT TTCGGCCTGG ATCCGCTGCT GGGAATCATG GCCGGCGCGG TGTCGCTGGA GGGCGGCTTC GGCGCGGCGG CGGCCTTCGG ACCGGTGGCG GAAGGCCTCG GCGCCCAGGG CGCGACCACC GTGGCGCTGG CCTCGGCCAC CTTCGGCATG GTCGCCGGCG GCCTGCTCGG CAGTCCGGTG GCACGCTGGC TGATCGAGCG CAATCGCCTG CTGGTGCGGG CGGAAAGCGA CAGCGAGCTG GAAGCCCTCG GCCAGCAGGA ACAGCGCCAG CACGCGGTGA CCGCGCTGGA CGGCAACCTG CTGCTGCGCC TGCTGACCTG CGTGCTGCTG GTGATGGTGC TCGGTTTCTG GCTGGGCGAC GCGCTACAGG AACGCCTGGG CCTGGTGCTG CCCAGCTACG TCGGAGCGAT GTTCATCGCC ATCGTCCTGC GCAACCTCGA CGACCGGCTC GGCTGGCTGC GCATACCCGA CCACGCCATC GGCACCCTGG GCGACGTCTG CCTGGGCATC TTCCTGACCA TGGCGATGAT GAGCCTGAAG TTCTGGGAAC TGGAGAACCT CGGCCTGCCA CTGCTCGGCG TGCTGTTCAT CCAGGTCGTG GCGCTGCTGC TCCTGACCAT CTTCGTGCTG TTCCGCCTGC TCGGCCGCAA CTACGACGCA GCAGTGCTCT GCGCCGGCTT CCTCGGCCAT GGCCTGGGCG CGACGCCGAA CGCGGTGGCC AACATGGGTG CGGTCTGCGA ACACTACCGG GTGTTCTCGC GCAAGGCCTT CATCATCGTG CCGCTGTGCG GAGCGGTACT GATCGACCTG GTCGCGATTC CGGCGATCAC CTGGTTCATC AACGCCTTCA GCTGA
|
Protein sequence | MPTMHLDALS TTALALLLLA IGSQLKKRSR WLTRLCVPSP VIAGFGFAFL VWLLRDRGWL DIGLDTSLQT PLMVAFFTTV GLGGSLGLLR KGGKTLLVYL AACWALAILQ NLIGVGSAGL FGLDPLLGIM AGAVSLEGGF GAAAAFGPVA EGLGAQGATT VALASATFGM VAGGLLGSPV ARWLIERNRL LVRAESDSEL EALGQQEQRQ HAVTALDGNL LLRLLTCVLL VMVLGFWLGD ALQERLGLVL PSYVGAMFIA IVLRNLDDRL GWLRIPDHAI GTLGDVCLGI FLTMAMMSLK FWELENLGLP LLGVLFIQVV ALLLLTIFVL FRLLGRNYDA AVLCAGFLGH GLGATPNAVA NMGAVCEHYR VFSRKAFIIV PLCGAVLIDL VAIPAITWFI NAFS
|
| |