| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1950 |
|---|
| Symbol | |
|---|
| ID | 5358779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1980202 |
|---|
| End bp | 1980639 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640811003 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001347331 |
|---|
| Protein GI | 152987980 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00937035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACGATG TCCCCCCCTT CAGCGGCGCC AAGCTGGCGC TGTTCTACGG CGACCGCCTG
GTCGTCTACA AACGCGACGA AAAACCCGGC ATCCCCTTCC CCGGCTACTG GGACTTTCCC
GGCGGCGGCC GCGAAGGCCT GGAAACTCCC GCCGAATGCG CCCTGCGCGA ACTGGAGGAA
GAGTTCTCGA TCCGCCTGGA AGAACCACGC ATCGAATGGT TGCGACAGTA TCCGAGCACC
AGCGGCAGCG CGCCCTTCGC CTATTTCCTG GTGGCGCGCC TGGAGGACCG CGAGTTCGAG
GCCATCCGTT TCGGCGACGA AGGACAATAC TGGCGATTGA TGGAGGTGGA CGCCTACCTC
GCGCATGCCA TGGCCGTGCC CTACCTGCAG AGCCGGCTCG GCGACTATCT GCGGGAACGC
CGGCGCATCG GCGAATAA
|
|---|
| Protein sequence | MHDVPPFSGA KLALFYGDRL VVYKRDEKPG IPFPGYWDFP GGGREGLETP AECALRELEE
EFSIRLEEPR IEWLRQYPST SGSAPFAYFL VARLEDREFE AIRFGDEGQY WRLMEVDAYL
AHAMAVPYLQ SRLGDYLRER RRIGE
|
|---|
| |