| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1945 |
|---|
| Symbol | |
|---|
| ID | 5357319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1975355 |
|---|
| End bp | 1976206 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640810998 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001347326 |
|---|
| Protein GI | 152984169 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGC ATCCGCTGCA GCGTTTCTTT CATTCCATGC GGGCCAAGCG ACCGTTCGAC
TGGGTACGCT TCCAACGTCG CGATCTGCTG TTGATCGACC ATCCGCTGTG CCAGGCCGTA
TTCAGTCGGC AAGGGGCGCA GCTCCTGCAT TTCCAGCCGC AGGGCGAACG CCCGTTGCTG
TGGTGCGCCG GCGAATGGCC GGCGCTCAGC AGCGCGCCGG TACGCGGTGG CATCCCGGTC
TGCTGGCCGT GGTTCGGCAG TCATCCCAAC GGCAGCGAAT GGCCACAGCA GGGCTGGGCG
CGGCAACGCG AATGGCGCCT GCTCGACGCC TACGCCGACG AAAGCAAGGT GGTGGTGAGC
TGGCAACTGG ACCTGGAGGA CTGGCACGTG CGCCTCGATG CGCGCCTTGG CCAGCGCCTG
GAGCTGGAGC TGTGCAGCTA CCATGAGGAA GACGACGATT GCCTGTTCAG CTTCGCCCTG
CAGCCCTACT GGCGGGTCGG CGCGCTGAGC CGGGTGGTGG TGCACGGCAT GGAGCTGGAG
TCGGCTCGCG GCCAGCGCGG CGCTTCGCGG ATTCCGGGAA CCTGGATACC GCGCGGCGCG
GTCAAGCAGG TGCTCTATCA TCCCGGATCG CTGGTGCTGG AGGACGGTGG CTGGAACCGC
CGCCTGCGGA TCGACAAGAA CGTCAGCGCC GGCAGCGTGA TCTGGCACCC CGGCAGCCGC
CCGGTGGAGC AGGTCGAGCC GGGCGAAGCG GAACGCTTCC TCTGTATCGG CGCCGCCGGC
TACCGTCCCG GCGGGCTGAT CCTGGCGCCC GGCGAACGCA TGCGCCTGAG TCTCGCCGCC
GGCCTGCAAT AG
|
|---|
| Protein sequence | MLEHPLQRFF HSMRAKRPFD WVRFQRRDLL LIDHPLCQAV FSRQGAQLLH FQPQGERPLL
WCAGEWPALS SAPVRGGIPV CWPWFGSHPN GSEWPQQGWA RQREWRLLDA YADESKVVVS
WQLDLEDWHV RLDARLGQRL ELELCSYHEE DDDCLFSFAL QPYWRVGALS RVVVHGMELE
SARGQRGASR IPGTWIPRGA VKQVLYHPGS LVLEDGGWNR RLRIDKNVSA GSVIWHPGSR
PVEQVEPGEA ERFLCIGAAG YRPGGLILAP GERMRLSLAA GLQ
|
|---|
| |