| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1943 |
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| Symbol | oprB |
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| ID | 5359364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1973779 |
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| End bp | 1975143 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640810996 |
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| Product | outer membrane porin OprB precursor |
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| Protein accession | YP_001347324 |
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| Protein GI | 152985104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGA ACAAGAAAAC CAGGCCGGCC GCCAGGACAG TGGGCTGCCT GTTCGCTCTG
GGAGCCCTGG GCTTGGGAAA CGCGGCGCAC GCCGCCGAGG CCTTCGACCC GAATTCGAAA
TGGATGCTCG GCGACTGGGG CGGCAAGCGC ACCGAGCTGC TGGAGAAGGG CTACGACTTC
AAGCTGGAGT ACGTCGGCGA GGCGGCGGCC AACCTCGATG GCGGCTATGA CGACGACAAG
ACCGGGCGCT ACACCGACCA GTTCGCCCTG GGCGTGCACA TGGACCTGGA GAAGATCTTC
GGCTGGAAGG CCACCGAGTT CCAGTTCATG GTCACCGAGC GCAACGGCAA GAACCTCTCC
AACGACCGCA TCGGCGACCC GCGCGCCGGA CACATCAGCT CGGTGCAGGA GGTCTGGGGC
CGCGGGCAGA CCTGGCGGCT GACCCAGCTG TGGCTCAAGC AGCAGTACTT CGACGGAGCG
CTGGATGTGA AATTCGGCCG TTTCGGCGAG GGCGAGGACT TCAACAGCTT CCCCTGCGAC
TTCCAGAACC TGGCCTTCTG CGGCTCGCAG GTGGGCAACT GGGCGGGGAG CATCTGGTAC
AACTGGCCGG TCAGCCAGTG GGCGCTGCGG GTGAAGTACA ACTTCGCGCC GGACTGGTAC
GTGCAGGTCG GCGCCTACGA GCAGAACCCG TCGAACCTGG AGACCGGCAA TGGCTTCAAG
ATGAGCGGCA GCGGGACCAA GGGCGCGCTG CTGCCGGTGG AGCTGATCTG GCAGCCGAAG
GTCGGCGCCG AGCAACTGCC GGGCGAGTAC CGGCTGGGCT ACTACTACAG CACGGCGAAG
GCCGACGACG TGTACGACGA CGTCGACGGC CAGCCGCAGG GGCTGACCGG CAACGACTTC
AAGTCGCGCG GCAGCAAGCA TGGCTGGTGG GTGGTGGCGC AGCAGCAGGT CACGTCGCAC
AACGGCGATA CGTCGCGTGG GTTGAACCTG TTCGCCAACC TGACCGTCCA CGACAAGGCG
ACCAACGTGG TGGACAACTA CCAGCAGCTC GGGGTGGTCT ACAAGGGCCC GTTCGATGCG
CGGCCGAAGG ACGACATCGG CCTGGGCATC GCGCGCATCC ACGTTAACGA CGATGTGAAG
AAGCGCCAGC GCCTGGTGAA TCAGGTGAAC GGCATCGACG ACTATGACAA CCCGCTGTAC
CAGCCGCTGC AGGACACCGA GTACAACGCC GAGCTGTACT ACGGGGTGCA CGTGACCGAC
TGGCTGACGG TGCGGCCGAA CCTGCAGTAC ATCAAGCGCC CGGGCGGGGT CGACGAGGTC
GACAACGCGC TGGTGGCGGG GATCAAGATC CAGACGGTGT TCTGA
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| Protein sequence | MYKNKKTRPA ARTVGCLFAL GALGLGNAAH AAEAFDPNSK WMLGDWGGKR TELLEKGYDF
KLEYVGEAAA NLDGGYDDDK TGRYTDQFAL GVHMDLEKIF GWKATEFQFM VTERNGKNLS
NDRIGDPRAG HISSVQEVWG RGQTWRLTQL WLKQQYFDGA LDVKFGRFGE GEDFNSFPCD
FQNLAFCGSQ VGNWAGSIWY NWPVSQWALR VKYNFAPDWY VQVGAYEQNP SNLETGNGFK
MSGSGTKGAL LPVELIWQPK VGAEQLPGEY RLGYYYSTAK ADDVYDDVDG QPQGLTGNDF
KSRGSKHGWW VVAQQQVTSH NGDTSRGLNL FANLTVHDKA TNVVDNYQQL GVVYKGPFDA
RPKDDIGLGI ARIHVNDDVK KRQRLVNQVN GIDDYDNPLY QPLQDTEYNA ELYYGVHVTD
WLTVRPNLQY IKRPGGVDEV DNALVAGIKI QTVF
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