Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1891 |
Symbol | actP |
ID | 5354104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1928051 |
End bp | 1929706 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640810944 |
Product | acetate permease |
Protein accession | YP_001347272 |
Protein GI | 152986079 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.45053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCCC GTCTCCTCGC CGCGCTCGGT CTCGCCGCCT TCGCTCCGCT CCTCTGGGCC GACGCGCTGA CCGGCGACGT GCAGCGCCAG CCGCTGAACG TCTCGGCCAT CGTCATGTTC GTCGCCTTCG TCGGCGCGAC CCTTTGCATC ACCTACTGGG CTTCCAAGCG CAATCGCTCG GCGGCCGACT ACTACGCTGC CGGCGGCCGC ATCACCGGCT TCCAGAACGG CCTGGCGATC GCCGGCGACT ACATGTCCGC GGCTTCCTTC CTGGGCATTT CCGCGCTGGT CTTCACCTCC GGCTACGACG GTCTGATCTA TTCGATCGGC TTCCTGGTCG GCTGGCCGAT CATCCTCTTC CTGATCGCCG AACGCCTGCG CAACCTGGGC AAGTACACCT TCGCCGACGT CGCTTCCTAC CGCCTCAAGC AGAAGCAGAT CCGCACCCTC TCGGCCTGCG GCTCGCTGGT GGTGGTGGCC TTCTACCTGA TCGCGCAGAT GGTCGGCGCC GGCAAGCTGA TCGAGCTGCT GTTCGGCCTC AACTACCATG TCGCGGTGGT TCTGGTGGGT ATCCTGATGG TGCTCTACGT GCTGTTCGGC GGCATGCTGG CGACCACCTG GGTGCAGATC ATCAAGGCCG TGCTGCTGCT CTCCGGCGCC TCGTTCATGG CGATCATGGT GCTCAAGCAC GTCAACTTCG ACATCAGCAC GCTGTTCTCC GAAGCGATCA AGGTGCATCC GAAGGGCGAG GCGATCATGA GCCCGGGCGG CCTGGTCAAG GACCCGATCT CGGCGTTCTC CCTGGGCTTC GCGCTGATGT TCGGCACCGC CGGCCTGCCG CACATCCTGA TGCGCTTCTT CACCGTCAGC GACGCCAAGG AAGCGCGCAA GAGCGTGTTC TACGCCACCG GCTTCATCGG CTACTTCTAC ATCCTGACCT TCATCATCGG CTTCGGCGCG ATCCTGCTGG TCAGCACCAA CCCGGACTTC AAGGACGCCA CCGGCGCCCT GATCGGCGGC AACAACATGG CGGCGGTTCA CCTGGCCGAC GCGGTGGGCG GCAGCCTGTT CCTCGGCTTC ATCTCGGCGG TGGCCTTCGC CACCATCCTC GCGGTGGTCG CCGGGCTGAC CCTGGCCGGC GCCTCGGCCG TCTCCCACGA CCTCTACGCC AGCGTGTTCA AGGCCGGCAA GGCCAACGAG AAGGACGAAC TGCGGGTCTC GAAGATGACC ACCGTGGCCC TGGGCGTGGT CGCCATCGTG CTCGGCATCC TGTTCGAGAA GCAGAACATC GCCTTCATGG TCGGCCTGGC CTTCTCCATT GCCGCCAGCT GCAATTTCCC GGTGCTGCTG CTCTCCATGT ACTGGAAGAA GCTGACCACC CGCGGCGCCA TGATCGGCGG CTGGATGGGG CTGGTCACCG CGGTTGGTCT GATGATCCTC GGCCCGACCA TCTGGGTGCA GATCCTCGGC CACGAGAAAG CCATCTACCC GTACGAGTAC CCGGCGCTGT TCTCGATGAT CGTCGCCTTC GTCGGTATCT GGTTCTTCTC CATCACCGAC AAGTCGGCGG CGGCCGACGA GGAGCGCGCG CGCTTCTTCC CGCAGTTCAT CCGTTCCCAG ACCGGCCTGG GCGCCTCTGG CGCGGTGGCC CACTAA
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Protein sequence | MIARLLAALG LAAFAPLLWA DALTGDVQRQ PLNVSAIVMF VAFVGATLCI TYWASKRNRS AADYYAAGGR ITGFQNGLAI AGDYMSAASF LGISALVFTS GYDGLIYSIG FLVGWPIILF LIAERLRNLG KYTFADVASY RLKQKQIRTL SACGSLVVVA FYLIAQMVGA GKLIELLFGL NYHVAVVLVG ILMVLYVLFG GMLATTWVQI IKAVLLLSGA SFMAIMVLKH VNFDISTLFS EAIKVHPKGE AIMSPGGLVK DPISAFSLGF ALMFGTAGLP HILMRFFTVS DAKEARKSVF YATGFIGYFY ILTFIIGFGA ILLVSTNPDF KDATGALIGG NNMAAVHLAD AVGGSLFLGF ISAVAFATIL AVVAGLTLAG ASAVSHDLYA SVFKAGKANE KDELRVSKMT TVALGVVAIV LGILFEKQNI AFMVGLAFSI AASCNFPVLL LSMYWKKLTT RGAMIGGWMG LVTAVGLMIL GPTIWVQILG HEKAIYPYEY PALFSMIVAF VGIWFFSITD KSAAADEERA RFFPQFIRSQ TGLGASGAVA H
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