| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1869 |
|---|
| Symbol | |
|---|
| ID | 5354644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1908293 |
|---|
| End bp | 1909255 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640810922 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_001347250 |
|---|
| Protein GI | 152984739 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.846184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCAT TGCAAGGTAT CGAAGGTCGT GTCGAGTGGT CGGAAATCGC CGTCCCGTCC
TGCGGCCAGG GCGAAATCCG CATCCGCGTG GCGGCCGCCG GACTCAACCG CGCCGACCTG
TTGCAGAAGG CCGGGCTCTA CCCGCCGCCG CCCGGCGCCA GCCCGGCGCT GGGGCTCGAG
TGCTCCGGAG TGGTCAGCGA GGTGGGCGCG GGCAGCACCT GGCAGGTCGG CGACCGGGTT
TGCGCGCTGC TCGCCGGCGG CGGCATGGCC GAGGAAGTGG TGGTGGACGC GCGCCACGTG
CTGCCGGTCC CGGCAGGGCT GAGCCTGGCG GAGGCGGCGG GGATTCCGGA GGTCTACGCC
ACGGCCTGGC TGAACCTGTT CCAGCTGGCG GCGTTGCAGC CCGGCGAGAA GGTGCTGCTG
CACGCCGGCG CCAGCGGCGT CGGTTCGGCC GGCATCCAGC TGTGCAAGGC GTTCGGCAAT
CCCTGCTGGG TCAGCGTCGG CTCCGCCGAG CGCCTGGCCT ACTGCGAGTC CCTCGGTGCC
GCCGGCGGCG TGCTGCGCAA GCAGAGCCTG GAGTCGCTGC GCGACTTCGC GCCGTTCGAC
GTGATCCTCG ACCCGGTCGG CGCCCGCTAT GCGGCGCTCA ACCTGGAGCT GCTGCGGCGC
GACGGGCGCT GGGTGATCAT CGGCCTGATG GGCGGTCGCG AGGCGCAGCT GGACCTGGCG
CAACTGCTGG GCAAGCGTAT CCAGCTGACG GGGTCGACCC TGCGCACCCG CGACGCCGAC
TTCAAGGCGC AGCTGATCGC CGAGCTGGGC CTGAAGGTCT GGCCATTGTT CTCCGCCGGG
AAACTCCGCG CGCAGTTGGA GCGAACCTTC CCGATCGGCG ACGCCGGGGC GGCCTTCGAG
GCGCTGGCGA GCAACCAGGT GCAGGGCAAG GTGGTGCTGG TGGTGGATCC GTCACTGGCC
TGA
|
|---|
| Protein sequence | MNALQGIEGR VEWSEIAVPS CGQGEIRIRV AAAGLNRADL LQKAGLYPPP PGASPALGLE
CSGVVSEVGA GSTWQVGDRV CALLAGGGMA EEVVVDARHV LPVPAGLSLA EAAGIPEVYA
TAWLNLFQLA ALQPGEKVLL HAGASGVGSA GIQLCKAFGN PCWVSVGSAE RLAYCESLGA
AGGVLRKQSL ESLRDFAPFD VILDPVGARY AALNLELLRR DGRWVIIGLM GGREAQLDLA
QLLGKRIQLT GSTLRTRDAD FKAQLIAELG LKVWPLFSAG KLRAQLERTF PIGDAGAAFE
ALASNQVQGK VVLVVDPSLA
|
|---|
| |