Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1852 |
Symbol | |
ID | 5355258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1892027 |
End bp | 1892881 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640810905 |
Product | putative transcriptional regulator |
Protein accession | YP_001347235 |
Protein GI | 152985554 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.687343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGACG AGACGAGCGG AGAACATACG CATTTCTGGC GCGCCGCCGA ACTGGGCGGC GTCGAGTTGC TGCATGCGCG CTACGTCGAG CAGCGTTTCG CCCCCCATGT GCACAGCGGC TTCGCCCTGG TCTTCATCGA GCAGGGCGCG CAGCGCTTCC GCCATCGCGG CGGCGAGCAC CTGGCGCCCT GGGGCAGCAT GGTGCTGATC AACCCCGACG AAGTGCACAC CGGCTCCAAG GCCCATGACT CCGGCTGGCT CTATCGCGGC TACTACCCGG AGGTGGAGCA GATCGCCAGT ATCCTCGACG AGCTGGAAAT CCGCCACGGC GGGGTGCCGC GTTTCGCCGA CAGCGTGGTC CATGACCAGC CCCTGGCGCG CGCCTTCGTC CATCTGCACC GCTTGCTGGC CGACCACGCC GGCAGCCTGG AAACCCAGAC CTGCTGGCGC GAGACGCTGC TCGCCCTGTT CCGTCGCCAC GCCCGCCTGC CGGAGGCGCC GAAGGCCGGG TCGGAACCGT TGGCGGTCGC CCGCGCCCGC GAGTTGCTGG CGGCGCGTTT GCTCGACCCG CCGTCGCTGG AAGAACTGGC GGCTGCGGTG AATCTGTCGC CGTTCCACTT CGCCCGGGTG TTCCGCCGCG CCACCGGGAT GCCGCCGCAT GCCTGGCTCC GGCAACGGCG CCTGGAACAG GCCAGGGCGC TGCTCAAGAA TGGCCGGGCG CCGCTGGATG TCGCCCTGGA ACTGGGCTTC GCCGACCAGA GCCATCTCGG TCGCCAGTTC AAGCAGGCCT ACGGCGTGGC GCCGGGCGAG TACCGCGCGG CCTGTGCGCG CTCGTCCTTG ACGATGTGCG AATAA
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Protein sequence | MPDETSGEHT HFWRAAELGG VELLHARYVE QRFAPHVHSG FALVFIEQGA QRFRHRGGEH LAPWGSMVLI NPDEVHTGSK AHDSGWLYRG YYPEVEQIAS ILDELEIRHG GVPRFADSVV HDQPLARAFV HLHRLLADHA GSLETQTCWR ETLLALFRRH ARLPEAPKAG SEPLAVARAR ELLAARLLDP PSLEELAAAV NLSPFHFARV FRRATGMPPH AWLRQRRLEQ ARALLKNGRA PLDVALELGF ADQSHLGRQF KQAYGVAPGE YRAACARSSL TMCE
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