| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1850 |
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| Symbol | |
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| ID | 5359583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1887628 |
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| End bp | 1891107 |
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| Gene Length | 3480 bp |
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| Protein Length | 1159 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640810903 |
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| Product | putative two-component sensor |
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| Protein accession | YP_001347233 |
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| Protein GI | 152987761 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.460329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTGT CCATCGGGCT GATCGCCGTG GTCGCCCTGG TCTACATGGC CATCCTGTTC
GCCATCGCCT TCTATGGCGA TCGCCGCCGC ACCCCGCTCT CCCCCCGCCT GCGCGCCTGG
GTCTACAGCC TCTCCCTGGC GGTGTACTGC ACCAGCTGGA CCTTCTTCGG CGCGGTCGGC
CAGGCCACCG ACCAGCTCTG GTCGTTCCTG CCGATCTACC TCGGGCCGGT GCTGCTGATG
CTGTTCGCGC CCTGGGTGCT GCAGAAGATG ATCATGATCA GCAAGCAGGA GAACATCACT
TCCATCGCCG ACTTCATCGC CGCCCGCTAC GGCAAGTCGC AGGCGCTGGC GGTGGTGGTG
GCGCTGATCT GCATGGTCGG CGTGCTGCCC TACATCGCCC TGCAACTGAA AGGCATCGTC
CTCGGGGTGA ACCTGCTGAT CGGCTCCGGC GCCGACTCCA CCGGTACCCG CGCCCAGGAC
ACCGCACTGA TCGTGTCGCT GGTGCTGGCG CTGTTCACCA TCGTCTTCGG CACCCGCAGC
CTCGACGTCA CCGAGCACCA CCGCGGCATG GTCCTGGCCA TCGCCTTCGA GTCGCTGGTC
AAGCTCACCG CCTTCCTCGC CGTGGGCATC TTCGTCACCT TCGGCCTCTA CGACGGCTTC
GCCGATCTGT TCTCCCAGGC CCGCGCCGCG CCGCAACTGG CGGACTACTG GGAAGAGACC
GTGCACTGGC CGGCGATGCT GCTGCAGACC GGCGTGGCGA TGACCGCGAT CATGTGCCTG
CCGCGCCAGT TCCACGTCAC CGTGGTGGAG AACATCGAGC CGCGCGACCT CAACCTGGCA
CGCTGGGTGT TTCCCCTCTA TCTGGTGCTG GCCGCGCTGT TCGTGGTGCC GATCGCCCTC
GCCGGGCAGT TGCACCTGCC CGCCGGGGTG ATGCCGGACT CCTTCGTCAT CAGCCTGCCG
CTGGCCGAGG CGCACCCGGC GCTGGCCCTG CTGGCGTTCA TCGGCGGCGC CTCGGCCGCC
ACCGGAATGG TGATCGTGGC CAGCGTGGCG CTGTCGACCA TGGTCTCCAA CGACATGCTC
CTGCCCTGGC TGCTGCGGCG CCGGGAAAAG GACACCGAAC GGCCCTTCGA GGCCTTCCGC
CACTGGCTGC TGACCGTGCG CCGGGTGAGC ATCGCGGTGA TCCTGCTGCT CGCCTACGTG
GCCTACCGCC TGCTCGGCTC CAGCGCCAGC CTGGCGACCA TCGGCCAGAT CGCCTTTGCC
GCCATCGCCC AGCTCGGCCC GGCGATGATC GGCGCGCTGT ACTGGAAGCA GGCCAACCGC
CGCGGGGTCT TCGCCGGCCT CGCCGCCGGC TCCCTGCTGT GGGCCTATAC CCTGGTCCTG
CCGGTGGTGG CCAAGGGCCT CGGCTGGCCG CTGGAACGCA TTCCCGGCCT GACCTGGCTG
GCGAGCAACC CGTTCGGCCT GCCGATCGAA CCGCTGACCC AGGGCGTGCT GATCTCCCTG
GTCGGCAATT TCGCCCTGTT CGGTCTGGTC TCGGTGCTCT CGCGCACCCG TGTGTCCGAG
CACTGGCAGG CCAGCCGCTT CATCGGCCAG GAGATTTCCC AGCGGCAGAA CTCGCGCTTC
ATGCTCGCGG TACAGGTGGA AGACCTGCTG ATGCTCGCCG CGCGCTTCGT CGGCGAGGAA
CGCGCGCGGC AAAGCTTCAT CCGCTTCGCC TACCGCCAGG GCAAGGGCTT CACTCCGAAC
CAGACCGCCA ACAACGAGTG GATCGCGCAC ACCGAGCGCC TGCTCGCCGG CGTGCTCGGC
GCGTCCTCGG CGCGGGCGGT GGTGAAGGCC GCCATCGAGG GCCGCGAGAT GCAGGTGGAG
GACGTGGTGC GGATCGCCGA CGAAGCCTCC GAGGTGCTGC AATTCAACCG CGCCCTGCTG
CAGGGCGCGA TCGAGAACAT CACCCAGGGC ATCAGCGTGG TCGACCAGTC GCTGCGCCTG
GTGGCCTGGA ACCACCGCTA CCTGGAGCTG TTCGAGTATC CCGACGGGCT GATCTACGTC
GGCCGGCCGA TCGCCGACAT CATCCGCTAC AACGCCGACC GCGGCCTGTG CGGCCCGGGG
GACCCGGACA TGCACGTGGC CAAGCGCCTT TACTGGATGC GCCAGGGCAC CCCGCATACG
TCCGAGCGGC TGTTCCCCAA CGGCCGGGTC ATCGAGCTGA TCGGCAACCC GATGCCCGGC
GGCGGCTTCG TCATGAGCTT CACCGACATC ACCGCCTACC GCGAGGCCGA ACAGGGCCTC
AAGGGCGCCA ACGAATCGCT GGAGCAGCGT GTCCAGGAGC GTACCCAGGA ACTCTCGCAG
CTGAACCAGG AACTCAGCGA GGCGAAGAGC AACGCCGAGG CCGCCAACCA GTCGAAGACC
CGCTTCCTCG CCGCCGTCAG CCACGACCTG ATGCAGCCGC TGAACGCCGC GCGGTTGTTC
TCCGCGGCGC TCGCCCACCA GGATGCGCTG CCCGGCGAGG TCCGCGACCT GGTGCAGCAT
CTCGATTCCT CGCTGCGTTC CGCCGAGGAC CTGATCACCG ACCTGCTGGA CATCTCGCGC
CTGGAAAGCG GCCGGGTCAG CGCCGAACGC AATCCGTTCC CGCTGAACAA CCTCTACGAT
GCCCTCGGCG TCGAATTCAA GGCGCTGGCC CAGGAACAGG GCCTGCATTT CCGCCTGCGC
GGCAGCCAGC TGCGGGTGGA CAGCGACATC AAGCTGCTGC GACGCATCCT GCAGAACTTC
CTGACCAACG CCTTCCGCTA CGCCAAGGGC CACGTGCTGC TCGGCGTGCG TCGCGAAGAT
GGCTACCTGC GCCTGGAGGT CTGGGACCAG GGCCCGGGCA TCCCGCCGGA CAAGCAGAAG
GTCATCTTCG AGGAGTTCAA GCGCCTGGAC AGCCACCAGA CCCGCGCCGA GAAGGGCCTG
GGCCTCGGCC TGGCGATCGC CGACCGGCTC TGCAAGGTCC TCGGCCATCC GCTGGAAGTG
CGCTCCTGGC CGGGCAAGGG CAGCGTCTTC AGCGTCCGCG TGCCGCTGGC GCGCCAGGCG
CCACCGGTCC TCGCCAACGG CCACAAGGCC GAGCCAGCGC AGGCGCTGAA CGGCGCCCAG
GTGCTCTGCG TGGACAACGA GGACAGCATC CTCACCGGCA TGAACAGCCT GCTCAGCCGC
TGGGGCTGCC AGGTCTGGAC CGCGCGCAGC CGCGACGAGT GCGCGGCGTT GCTGGACAGC
GAGATGCGTC CGCAACTGGC ATTGATCGAC TATCACCTGG ACGATGGCGA GACCGGCACG
CAACTGATGG CCTGGCTGCG CACACGCCTG GGCGAACCGG TGCCGGGCGT GGTGATCAGC
GCCGACGCGC GACCGGAGCT GGTGGCGGAG ATCCATGCCG CCGGCCTCGA CTACCTGTCC
AAGCCGGTCA AGCCGGCCGC GTTGCGCGCC CTGCTCAGCC GCCACCTGAG CCTGCGCTGA
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| Protein sequence | MSLSIGLIAV VALVYMAILF AIAFYGDRRR TPLSPRLRAW VYSLSLAVYC TSWTFFGAVG
QATDQLWSFL PIYLGPVLLM LFAPWVLQKM IMISKQENIT SIADFIAARY GKSQALAVVV
ALICMVGVLP YIALQLKGIV LGVNLLIGSG ADSTGTRAQD TALIVSLVLA LFTIVFGTRS
LDVTEHHRGM VLAIAFESLV KLTAFLAVGI FVTFGLYDGF ADLFSQARAA PQLADYWEET
VHWPAMLLQT GVAMTAIMCL PRQFHVTVVE NIEPRDLNLA RWVFPLYLVL AALFVVPIAL
AGQLHLPAGV MPDSFVISLP LAEAHPALAL LAFIGGASAA TGMVIVASVA LSTMVSNDML
LPWLLRRREK DTERPFEAFR HWLLTVRRVS IAVILLLAYV AYRLLGSSAS LATIGQIAFA
AIAQLGPAMI GALYWKQANR RGVFAGLAAG SLLWAYTLVL PVVAKGLGWP LERIPGLTWL
ASNPFGLPIE PLTQGVLISL VGNFALFGLV SVLSRTRVSE HWQASRFIGQ EISQRQNSRF
MLAVQVEDLL MLAARFVGEE RARQSFIRFA YRQGKGFTPN QTANNEWIAH TERLLAGVLG
ASSARAVVKA AIEGREMQVE DVVRIADEAS EVLQFNRALL QGAIENITQG ISVVDQSLRL
VAWNHRYLEL FEYPDGLIYV GRPIADIIRY NADRGLCGPG DPDMHVAKRL YWMRQGTPHT
SERLFPNGRV IELIGNPMPG GGFVMSFTDI TAYREAEQGL KGANESLEQR VQERTQELSQ
LNQELSEAKS NAEAANQSKT RFLAAVSHDL MQPLNAARLF SAALAHQDAL PGEVRDLVQH
LDSSLRSAED LITDLLDISR LESGRVSAER NPFPLNNLYD ALGVEFKALA QEQGLHFRLR
GSQLRVDSDI KLLRRILQNF LTNAFRYAKG HVLLGVRRED GYLRLEVWDQ GPGIPPDKQK
VIFEEFKRLD SHQTRAEKGL GLGLAIADRL CKVLGHPLEV RSWPGKGSVF SVRVPLARQA
PPVLANGHKA EPAQALNGAQ VLCVDNEDSI LTGMNSLLSR WGCQVWTARS RDECAALLDS
EMRPQLALID YHLDDGETGT QLMAWLRTRL GEPVPGVVIS ADARPELVAE IHAAGLDYLS
KPVKPAALRA LLSRHLSLR
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