Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1842 |
Symbol | oprP |
ID | 5356299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1878642 |
End bp | 1879913 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640810895 |
Product | outer membrane porin OprP precursor |
Protein accession | YP_001347225 |
Protein GI | 152989410 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3746] Phosphate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGGCC TGGCGATTTC CGCGCAGAGC CTGGCCGGGA CAGTGACCAC CGATGGCGCC GATATCGTGA TCAAGACCAA GGGCGGGCTG GAAGTCGCCA CCACCGACAA GGAATTCAGC TTCAAGCTCG GCGGCCGCCT GCAGGCCGAC TACGGCCGCT TCGACGGCTA CTACACGAAC AACGGCAATA CCGCCGACGC CGCCTATTTC CGCCGCGCCT ACCTCGAGTT CGGCGGCACC GCGTACAAGG ACTGGAAATA CCAGATCAAC TACGACCTGT CGCGCAACGT CGGCAACGAC AGTGCCGGTT ACTTCGACGA AGCTTCGATC ACCTACACCG GCTTCAATCC GCTGAACCTG AAATTCGGCC GCTTCTACAC CGACTTCGGC CTGGAAAAGG CCACCAGTTC CAAGTGGGTC ACCGCCATGG AGCGCAACCT GACCTACGAG ATCGCCGAGT GGGTCAACGA CAACGTCGGC ACCGGCCTCC AGGCCAGCTC CGTGGTGGGC GGGACGGCCT TCCTTTCGGG CAGCGTGTTC AGCGAGAACA ACAACGACAC CGATGGCGAC AGCGTCAAGC GCTACAACCT GCGGGGCGTG TTCGCGCCGC TGCACGAGTC GGGCAACGTC GTGCACCTGG GCCTGCAATA CGCCTACCGC GACCTGAAGG ACAGCGCGGT GGACACCCGC ATCCGTCCGC GGATGGGCAT GCGCGGCGTT TCCACCAATG GCGGCAACGA TGCCGGCAGC AACGGCAACC GCGGCCTGTT CGGTGGCAAC CCGGCGCTCG AAGGGTTGTG GAAGGACGAT TCGGTCTGGG GCCTGGAAGG CGCCTGGGCG CTGGGCGCCT TCTCGGCCCA GGCCGAGTAC CTGCGGCGCA CGGTCAAGGC CGAGCAGAAC CGCGAGGACC TCAAGGCTTC CGGCTACTAC GCGCAACTGG CCTATACCCT CACCGGCGAG CCGCGCATCT ACAAGCTGGA CGGCGCCAAG TTCGACTCCA TCAAGCCGGA GAACAAGGAA ATCGGTGCCT GGGAGCTGTT CTACCGCTAC GACTCGATCA AGGTCGAGGA CGACAACATC GTGGTCGACC GCGCCACCCG TGAAGTCGGT GACGCCAAGG GCAAGACCCA CACCCTGGGC GTCAACTGGT ATGCCAACGA GTCGGTGAAG GTCTCCGCCA ACTACGTCAA GGCGAAGACC GACAAGGTCA GCAATGCCAA CGGCGATGAC AGCGGCGATG GCGTGGTGAT GCGCCTGCAG TACGTGTTCT GA
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Protein sequence | MLGLAISAQS LAGTVTTDGA DIVIKTKGGL EVATTDKEFS FKLGGRLQAD YGRFDGYYTN NGNTADAAYF RRAYLEFGGT AYKDWKYQIN YDLSRNVGND SAGYFDEASI TYTGFNPLNL KFGRFYTDFG LEKATSSKWV TAMERNLTYE IAEWVNDNVG TGLQASSVVG GTAFLSGSVF SENNNDTDGD SVKRYNLRGV FAPLHESGNV VHLGLQYAYR DLKDSAVDTR IRPRMGMRGV STNGGNDAGS NGNRGLFGGN PALEGLWKDD SVWGLEGAWA LGAFSAQAEY LRRTVKAEQN REDLKASGYY AQLAYTLTGE PRIYKLDGAK FDSIKPENKE IGAWELFYRY DSIKVEDDNI VVDRATREVG DAKGKTHTLG VNWYANESVK VSANYVKAKT DKVSNANGDD SGDGVVMRLQ YVF
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