| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1827 |
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| Symbol | hrpA |
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| ID | 5359692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1863592 |
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| End bp | 1867572 |
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| Gene Length | 3981 bp |
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| Protein Length | 1326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640810880 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001347210 |
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| Protein GI | 152988643 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.30937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC AGACTCCTTC CTTCGACCAG CTCGCCAGGC GTATCGACCA GGCCCAGATC
AGCGACCGCC ACCGCCTGCG CCGGCAGCTC CACGAACTGC GCAAGCAGCC CGACGACGCG
CGCCTGGCGC AGTGGGTCGA GCGCTTCCAG GCTTCCTGCG CCAAGGTCGA GGCGCGCCGC
GCCAGCGTGC CGGCGATCCG CTACGACGAC AGCCTGCCGA TCGCCGCCAA GCGCGACGAG
ATCAAGGCCG CCATCGCCGC CCACCAGGTG GTGGTGATCG CCGGCGAGAC CGGTTCGGGC
AAGACCACCC AGTTGCCGAA GATCTGCCTG GAGCTGGGGC GTGGCACCCA CGGCCTGATC
GGCCACACCC AGCCGCGCCG GCTGGCGGCA CGCAGCGTCG CCACGCGGGT CGCGGAAGAG
ATCGGTACGC CGCTGGGCGC GCTGGTCGGC TACCAGGTGC GCTTCGAGGA CCAGAGCGAC
GACAGTACGC TCATCAAGCT GATGACCGAC GGTATCCTCC TGGCCGAGAC CCAGCACGAC
CGCTACCTGG AGCGCTACGA CACGCTGATT GTCGACGAGG CCCACGAGCG CAGCCTGAAC
ATCGATTTCC TCCTCGGCTA CCTGAAGACC CTGCTGCACC GGCGTCCGGA CCTGAAGCTG
GTCATCACCT CGGCGACCAT CGACCTGGAA CGCTTCTCCA GGCATTTCGA CGGCGCCCCG
GTGATCGAGG TATCCGGCCG CACCTATCCG GTGGAGACCT GGTACCGGCC GCTGGCGGCG
GAAACCGACG AGGAGGGCAA CCGGGTCGAG GACGACCTCT CGGTGGACCA GGGCATCCTC
GCCGCCCTCG AGGAGATCGC CGCCCACGAG CGCGAGCTCG GCAAGCGGCC CGGCGACGTG
CTGGTGTTCC TCCCCGGCGA GCGGGAGATC CGTGACGCCG CGGAGATGCT GCGCAAGGCC
AACCTGCGCC ATACCGAGGT GCTGCCGCTG TACGCGCGAC TGACCCCGGC CGAGCAGCAG
AAGATCTTCC AGCCGCGCCC GGGACGCAAG ATCGTGCTGT CCACCAACGT CGCGGAGACC
TCGCTGACGG TGCCGGGCAT CCGCTACGTG ATCGACAGCG GCACCGCGCG GATCAGCCGC
TACAGCTACC GCGCCAAGGT CCAGCGGCTG CCCATCGAGG CGGTGTCGCA GGCCAGCGCC
AACCAGCGCA AGGGCCGTTG CGGACGGGTC GAGCCGGGCA TTTGCGTGCG CCTCTACAGC
GAGGAGGACT TCAACGCGCG TCCGGCCTTC ACCGATCCGG AAATCCTCCG CACCAACCTG
GCCGCGGTGA TCCTGCAGAT GCTCCACCTG CGCCTGGGCG ACATCGAGGC GTTCCCCTTC
ATCGAGCCGC CGGACGGCAA GGCGATCAAG GACGGTTTCA CCCTCTTGCA GGAGCTTTCC
GCGGTCAACC GCGAAGGCCA GCTGACCCCG CTGGGGCGCC AGCTGGCGCG CCTGCCGATC
GACCCACGGC TGGGGCGCAT GCTGCTGGAG GCGGCCCAGC AGGGCAGCCT CGAGGAGGTG
CTGACGGTGG CCAGCGCGCT GTCCGTGCAG GATCCGCGCG AGCGTCCGGT GGAGCGCCAG
CAGGCCGCCG ACCAGGCGCA TGCGCAATGG AAAGACCCGG ATTCCGACTT CGCCGCGCTG
ATCAATCTCT GGCGCGGCTT CGAGGAACAG CGCCAGGCGC TGGGTTCCAA CGCCCTGCGC
AGCTGGTGCC GGAAGAATTT CCTCAACTAC CTGCGCCTGC GCGAGTGGCG CGACGCCCAT
CGTCAGCTGA CCCTGATCTG CCGCGAGCTG AAGCTGCCGT TCGGGCGCCC GGCCAGGGCC
GAGGCGCGCA AGCCGGAGGC GAAGAAAGGC GCGCCGGCCA ATGGCGAGCG CGAGCTGCCG
GGCATCGACT ACGCGGCGGT GCACAAGGCG ATCCTGTCCG GCCTGCTCAG CCAGATCGGC
CAGAAGGCCG AGGAAGGCGA CTACCTTGGC GCCCGCCAGC GACGCTTCTG GATCCATCCG
TCCAGCGGCA TCGCCCGCAA GCGCCCGCAA TGGATCATGG CCGCCGAACT GGTGGAGACC
ACCAAGCTGT TCGCGCGGAT GGTCGCGAAG ATCGAGCCGG ACTGGCTGGA GCCGCTGGCC
GGGCACCTGA TCAAGACCAA CCACTTCGAG CCGCACTGGG AGAAGCGTCG CGGCCAGGTG
GTGGCGTTCG AGCAGGTCAC CCTCTACGGC CTGATCGTCA TCGGCCGACG TCCGGTGCAC
TACGGCCCGA TCGACCCGCC GGTGGCGCGC GAGCTGTTCA TCCGCGAAGG CCTGGTACGT
GGCGAGATCA ACAGCCGCGC CAGGTGCCTG AGTGCCAACC GGCAGTTGCT GGAAAAGCTC
GACGAGCTGG AAGCCAAGGC GCGCCGGCGC GACATCCTGG CCGACGAGGA AACCCTGTTC
GCCTATTACG ACGCGCGCCT GCCGGCGGAC ATCTACCAGA CCGCCAGTTT CGAGAAATGG
TACGCCCGCG AGCGACAGAA CCAGCCGGAC CTGCTGCTGA TGCGCGAGGA AGACGTGCTG
GCCCGCGAAG CCAGCGAGGT CACCGCCGCG CAGTACCCGG ACCGCCTGCG CCTGGGCGAC
CTGCAGCTGT CGCTGAGCTA CCAGTTCGAG CCCGGCACCG CGCGCGACGG TGTCACCGTG
CGGGTACCGG CGCCGCTGCT GCCGCAGTTG CCGGCCGAGC GCATCGACTG GCTGGTGCCC
GGCCTGCTCT ACGAGAAGGC GGTGGCGCTG GTGCGCAACC TGCCGAAGGC GATCCGCAAG
AGCTTCGTGC CGGTACCGGA CTTCGTCCGT GCCGCCCTGG AGCGCATCAC CTTCGGCGAA
GGCTCGCTGC CCCAGGCGCT GGGCCGCGAG CTGCAGCGCA TGACCGGCGC GCGGGTGGCC
GACGAAGCCT GGGCCGAGGC GGCGACGCAA CTGGACGATC ACCTGCGGAT GAACATCGAG
GTGGTCGACG CCCAGGGCAA GTTCCTCGGC GAGGGCCGCG ACCTGGCCGA ACTCACCGCG
CGTTTCGCCG AAGCCAGCCA GGCGGCGCTG GCGATACCCC AGGCGAGCGA GGAACAGCAG
CGGCCGGTGG AGGCCAAGGC CTTCGCCAGC GTCGCCGAGA AGGTCCAGCA GAAGATCGCC
GGGCTGTCGA TGACAGTGTA TCCGGCGCTG GTGGAAGAGC AGGGCGAGGT CAAGGAAGGG
CGCTTCCCGA CCCAGGCCGA GGCCGACTAC CAGCACCGCC GCGCCCTGCA ACGACTGCTG
TTGCAGCAAC TGGCCGAACC GGCCAGGTAC CTGCGCGCCA AGCTGCCGGG GCAGACCGAG
ATGGGCCTGC TGTACCGCGA GCTGGGACGG GTCGAGGCGC TGGTCGAGGA CATCCTTCTG
GCCAGCCTCG ACAGCTGCGT GCTGCAGGGC GAAAGCCTGC CGCGCGACGG TGCCGCCCTG
GCGGCGCTGG CCGAACGCAA GCGCGGCGCC TGGAACGAGC ATGCCGAGCG CCTGGCGCGC
CTGGTGCTGG AGATCCTCAA GCTCTGGCAC GGCCTGCAGA AGCGCTTCAA AGGCAAGGTC
GACCTGGCCA TGACGGTGCC GCTGAACGAC GTCAAGGGCC AGTTGGCCAA CCTGGTCTAT
CCGGGCTTCG TCCGCGCCAC TCCGCTGGAG TGGTTGAAGG AGTATCCGCG TTACCTCAAG
GCTGTCGAGC AGCGCCTGGA CAAGGTCGCT GGCCAGGTCC AGCGCGACCG GGTGTGGAGC
GGCGAGCTGG GCGAACTCTG GGCGCAATAC CAGGCGCGCC TCGCCAAGCA CGCCCAGGAA
GGCAAGCGCG ACGCCGAGTT GCAGTTGTAT CGCTGGATGC TGGAGGAGTA CCGGGTCTCG
CTGTTCGCCC AGCAACTGGG AACCCGGCTG CCGGTCTCGG ACAAGCGCCT GGCCAAGCAG
TGGAGCCAGG TCGAGGGCTA G
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| Protein sequence | MTDQTPSFDQ LARRIDQAQI SDRHRLRRQL HELRKQPDDA RLAQWVERFQ ASCAKVEARR
ASVPAIRYDD SLPIAAKRDE IKAAIAAHQV VVIAGETGSG KTTQLPKICL ELGRGTHGLI
GHTQPRRLAA RSVATRVAEE IGTPLGALVG YQVRFEDQSD DSTLIKLMTD GILLAETQHD
RYLERYDTLI VDEAHERSLN IDFLLGYLKT LLHRRPDLKL VITSATIDLE RFSRHFDGAP
VIEVSGRTYP VETWYRPLAA ETDEEGNRVE DDLSVDQGIL AALEEIAAHE RELGKRPGDV
LVFLPGEREI RDAAEMLRKA NLRHTEVLPL YARLTPAEQQ KIFQPRPGRK IVLSTNVAET
SLTVPGIRYV IDSGTARISR YSYRAKVQRL PIEAVSQASA NQRKGRCGRV EPGICVRLYS
EEDFNARPAF TDPEILRTNL AAVILQMLHL RLGDIEAFPF IEPPDGKAIK DGFTLLQELS
AVNREGQLTP LGRQLARLPI DPRLGRMLLE AAQQGSLEEV LTVASALSVQ DPRERPVERQ
QAADQAHAQW KDPDSDFAAL INLWRGFEEQ RQALGSNALR SWCRKNFLNY LRLREWRDAH
RQLTLICREL KLPFGRPARA EARKPEAKKG APANGERELP GIDYAAVHKA ILSGLLSQIG
QKAEEGDYLG ARQRRFWIHP SSGIARKRPQ WIMAAELVET TKLFARMVAK IEPDWLEPLA
GHLIKTNHFE PHWEKRRGQV VAFEQVTLYG LIVIGRRPVH YGPIDPPVAR ELFIREGLVR
GEINSRARCL SANRQLLEKL DELEAKARRR DILADEETLF AYYDARLPAD IYQTASFEKW
YARERQNQPD LLLMREEDVL AREASEVTAA QYPDRLRLGD LQLSLSYQFE PGTARDGVTV
RVPAPLLPQL PAERIDWLVP GLLYEKAVAL VRNLPKAIRK SFVPVPDFVR AALERITFGE
GSLPQALGRE LQRMTGARVA DEAWAEAATQ LDDHLRMNIE VVDAQGKFLG EGRDLAELTA
RFAEASQAAL AIPQASEEQQ RPVEAKAFAS VAEKVQQKIA GLSMTVYPAL VEEQGEVKEG
RFPTQAEADY QHRRALQRLL LQQLAEPARY LRAKLPGQTE MGLLYRELGR VEALVEDILL
ASLDSCVLQG ESLPRDGAAL AALAERKRGA WNEHAERLAR LVLEILKLWH GLQKRFKGKV
DLAMTVPLND VKGQLANLVY PGFVRATPLE WLKEYPRYLK AVEQRLDKVA GQVQRDRVWS
GELGELWAQY QARLAKHAQE GKRDAELQLY RWMLEEYRVS LFAQQLGTRL PVSDKRLAKQ
WSQVEG
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