Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1812 |
Symbol | he |
ID | 5356291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1848661 |
End bp | 1851507 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640810865 |
Product | ATP-dependent helicase HepA |
Protein accession | YP_001347195 |
Protein GI | 152983542 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.502146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAGT ATCAACCGGG GCAACGCTGG ATCAGCGACA GTGAAGCGGA ATTGGGCCTG GGGACCATCC TGGCCCAGGA TGGCCGCCTG CTCACCGTGC TCTATCCGGC GACCGGCGAT ACCCGCCAGT ACGCCTTGCG CAATGCGCCG CTGACCCGCG TGCGCTTCGC CCCCGGCGAC GAGGTGACGC ACTTCGAGGG CTGGAAGATG ACCGTCCGCG AAGTCGAGGA AAGCGAAGGC CTGCTGGTCT ACCACGGCCT CACCGCGCAG AACGAGCAGC GCACCCTGCC GGAAACCCAG CTCTCCAACT TCATCCAGTT CCGCCTCGCC AGCGACCGCC TGTTCGCAGG CCAGATCGAC CCCCTGCCCT GGTTCTCCCT GCGCTATCAC ACCCTGGAAC GCCGCAGCCA GTTGCTCCAG TCGTCGCTCT GGGGCCTCGG CGGCGCCCGC GCCCAGCCGA TCGCTCACCA ACTGCACATC GCCCGCGAAG TTGCCGACCG CATGGCGCCG CGCGTCCTGC TGGCCGACGA AGTGGGCCTG GGCAAGACCA TCGAGGCCGG CCTGATCATC CATCGCCAAC TGCTCTCCGG CCGCGCCGGG CGGGTGCTGA TCCTGGTCCC GGAAAACCTC CAGCACCAGT GGCTGGTGGA GATGCGTCGG CGCTTCAACC TGCAGGTCGC TTTGTTCGAC AGCGAGCGCT TCGCCGAAAG CGATGCCAGC AACCCCTTCG AGGACACCCA GCTGGCCCTG GTCGCCCTGG AGTGGCTGAA GGACGACGAG CGCGCCCAGG ACGCCCTGTT CGCCGCCGGC TGGGACCTGC TGGTGGTCGA CGAAGCCCAC CACCTGGTCT GGCACCAGGA CCAGGTCAGC GCCGAATACG CGCTGGTCGA ACAACTGGCG GAGATCATTC CCGGCGTCCT GCTGCTCACC GCGACCCCGG AGCAACTCGG CCAGGACAGC CACTTCGCGC GCCTGCGCCT GCTCGATCCG AACCGTTTCC ATGACCTCGA GGCCTTCCGC CGGGAAAGCG AGCAATACCG CCCGGTCGCC GAAGCGGTGC AGGAACTGCT CGACCACGGC AGTCTTTCCG CCGGCGCGCG CCAGGCCATC CACGGCTTCC TCGGCAGCGA GGGCGACGAG CTGCTGGCCA GCGTCGAGGG TGGCGATGAA GAAGCCCGCT CGCGCCTGGT CCGCGAACTG CTCGATCGCC ATGGCACCGG CCGCGTGCTG TTCCGCAATA CCCGCGCCGC CGTGCAGGGC TTCCCTCAGC GCGAGCTGCA CGCCTATCCG CTACCGATGC CGAGCCAGTA CCAGGAGCTG CCCGCCGGCG AGCACCCGGA CCTGTATCCG GAGGTCAACT TCCAGCAGCA GTGGGAAGAC GCCGACGACA ACAACCGCTG GTGGCGCTTC GACCCGCGCG TCGAGTGGCT GATCGATACC CTCAAGATGC TCAGGCAGTT CAAGGTCCTG GTCATCTGCG CCCACGCCGA GACCGCCCTC GACCTGGAGG ACGCCCTGCG CCTGCGCTCG GGCATCTCCG CCACGGTGTT CCACGAAGGC ATGAGCATCC TCGAGCGTGA CCGCGCCGCC GCCTACTTCG CCGACGAAGA GTTCGGCGCC CAGGTGCTGA TCTGCTCGGA AATCGGCAGC GAAGGTCGCA ACTTCCAGTT CGCCCACCAC CTGGTGCTGT TCGACCTGCC GGCCCACCCG GACCTGCTCG AACAGCGCAT CGGCCGTCTC GACCGGATCG GCCAGCAGCA CACCATTCAG CTGCATGTCC CGCACCTGGA GAACAGCGCC CAGCAACGCC TGTTCCAGTG GTACCACCAG GCGCTCAACG CCTTCCTCAA CACCTGCCCC ACCGGCAATG CCCTGCAGCA CGAGTTCGGC CCGCGCCTGC TGCCGCTGCT CGACGGCGGC GAGGACAAGG CCTGGGAGGC GCTGCTCGAC GAAGGCCGCG CCCGTCGCGA AGCCCTCGAG GCGGAGCTGC ACAGCGGGCG CGACCGCCTG CTGGAGCTGA ATTCCGGCGG TGCCGGCGAA GGTGAGGCGC TGGTGGAGGC GATCGAGGAG CAGGACGACG ACTTCGCCCT GCCGATCTAC ATGGAGCGCC TGTTCGACGC CTACGGCATC CATAGCGAAG ACCATTCGGA AAATGCCCTG ATCCTCAAGC CGAGCGAGAA GATGCTCGAC GCCGGCTTCC CCCTCGGCGA CGACGAAGGC GTGACCATCA CCTACGACCG CGCCCAGGCC CTGGCCCGCG AGGACATGCA GTTCCTCACC TGGGAGCACC CGATGGTGCA GGGCGGCATG GACCTGGTGT TGTCCGGCTC GATGGGCAAT ACCTCGGTGG CGCTGATCAA GAACAAGGCG CTGAAACCCG GGACCGTGCT GCTCGAACTG CTGTTCGTCA GCGAGGCCGT CGCGCCGCGC GCCCTCCAGC TCGGCCGCTG GCTGCCGCCG CAGGCGCTGC GCTGCCTGCT CGATGGCAAC GGCAATGACC TGGCCGCCCG GGTTTCCCTG GAAACCCTCA ACGACCAGTT GGAAAGCGTG CCGCGGGTCA GCGCCAACAA GTTCGTCCAG GCCCAGCGCG ACGTGCTGGC CAAGCAGTTC GACGTGGCCG AGGGCAAGAT CGTCCCGCGT CATGAGGAAC GCGTAGCCAA GGCCAAGCAG CAGTTCGCCG CCGCCATGGA CGAGGAACTG GCGCGCCTGA CCGCCCTCAA GGCGGTCAAC CCGAGCGTCC GCGACAGCGA GCTGGACAGC CTGCGCACCC AGCGCGAGGA AGGCCTGGCC CTGCTCGACA AGGCATCCCT GCGCCTGGAG GCGATCCGCA TCCTGGTCGC CGGCTGA
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Protein sequence | MAQYQPGQRW ISDSEAELGL GTILAQDGRL LTVLYPATGD TRQYALRNAP LTRVRFAPGD EVTHFEGWKM TVREVEESEG LLVYHGLTAQ NEQRTLPETQ LSNFIQFRLA SDRLFAGQID PLPWFSLRYH TLERRSQLLQ SSLWGLGGAR AQPIAHQLHI AREVADRMAP RVLLADEVGL GKTIEAGLII HRQLLSGRAG RVLILVPENL QHQWLVEMRR RFNLQVALFD SERFAESDAS NPFEDTQLAL VALEWLKDDE RAQDALFAAG WDLLVVDEAH HLVWHQDQVS AEYALVEQLA EIIPGVLLLT ATPEQLGQDS HFARLRLLDP NRFHDLEAFR RESEQYRPVA EAVQELLDHG SLSAGARQAI HGFLGSEGDE LLASVEGGDE EARSRLVREL LDRHGTGRVL FRNTRAAVQG FPQRELHAYP LPMPSQYQEL PAGEHPDLYP EVNFQQQWED ADDNNRWWRF DPRVEWLIDT LKMLRQFKVL VICAHAETAL DLEDALRLRS GISATVFHEG MSILERDRAA AYFADEEFGA QVLICSEIGS EGRNFQFAHH LVLFDLPAHP DLLEQRIGRL DRIGQQHTIQ LHVPHLENSA QQRLFQWYHQ ALNAFLNTCP TGNALQHEFG PRLLPLLDGG EDKAWEALLD EGRARREALE AELHSGRDRL LELNSGGAGE GEALVEAIEE QDDDFALPIY MERLFDAYGI HSEDHSENAL ILKPSEKMLD AGFPLGDDEG VTITYDRAQA LAREDMQFLT WEHPMVQGGM DLVLSGSMGN TSVALIKNKA LKPGTVLLEL LFVSEAVAPR ALQLGRWLPP QALRCLLDGN GNDLAARVSL ETLNDQLESV PRVSANKFVQ AQRDVLAKQF DVAEGKIVPR HEERVAKAKQ QFAAAMDEEL ARLTALKAVN PSVRDSELDS LRTQREEGLA LLDKASLRLE AIRILVAG
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