Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1807 |
Symbol | |
ID | 5355960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1842822 |
End bp | 1843712 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640810860 |
Product | putative 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_001347190 |
Protein GI | 152989405 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTT CCCTGCCTTC CCTTGCCTTC GCCGGTCTCG GCCTGATGGG CGTGCCCATG TGCCGCCGGC TGCTGGCCGC CGGCTATCCG CTGGCGGTCT GGAACCGTTC GCCGGGCAAA CGCGAGCTGC TGGCGGCCGA GGGGGCGAAA GCCGTCGAAG TCCCGGCCGA CCTGGCCGCC GACGCGGAGA TCCTGATGCT TTGCCTGGCC GATACGGCGG CGGTGCGCGA AGTGGTGTTC GGCAGCGGCG GCATCGTCGA GAAAGGCAGG CCCGGACAGT TGCTGGTGGA TTTCTCCAGC GCCGAGCCGG CCGCCACCCG CGCGATGGCC GCCGAACTGG AGGCGCACTG CGGCATGCGC TGGGTCGACG CGCCGGTCTC CGGCGGTACG CCGGGTGCGG AAAGCGGCAG CCTGGCGATC ATGGCCGGCG GTCGCGAAGC GGACATCGGG CGCCTGCGGC CGGTCCTCGC GCACCTCGGC CAGCGCCTGA CGCGCATGGG CGAGGTCGGC GCCGGGCAGG TGACCAAGGT CTGCAACCAG ATGATCGTCG CCTGCAACGC CCTGGTGATC GCCGAGGTGG TGGCGCTGGC GGAGAACGCC GGGGTCGATG CCAGCCTGAT CGCGCCGGCG CTGGCCGGCG GCTTCGCCGA CTCGAAGCCG TTGCAGATCC TCGCCCCGCA GATGGCCGAG AGCCGCTACG AGCCGGTCAG GTGGCACGTG CGGACCCTGC TCAAGGATCT CGATACGGCG GTGAAGCTGT CCCGCGAGCA AGGCGCGGCC ACGCCGATGA GCGGACTGGC CGCGCAACTG ATGCGCCTGC ACGGCAGCCG GGGCTACCTC GAGCGCGACC CGGCGACCCT GGTCGAACAG TACCGTGCCG GCGACCAATG A
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Protein sequence | MSASLPSLAF AGLGLMGVPM CRRLLAAGYP LAVWNRSPGK RELLAAEGAK AVEVPADLAA DAEILMLCLA DTAAVREVVF GSGGIVEKGR PGQLLVDFSS AEPAATRAMA AELEAHCGMR WVDAPVSGGT PGAESGSLAI MAGGREADIG RLRPVLAHLG QRLTRMGEVG AGQVTKVCNQ MIVACNALVI AEVVALAENA GVDASLIAPA LAGGFADSKP LQILAPQMAE SRYEPVRWHV RTLLKDLDTA VKLSREQGAA TPMSGLAAQL MRLHGSRGYL ERDPATLVEQ YRAGDQ
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