Gene PSPA7_1793 details

Gene Information

• Locus tag: PSPA7_1793
• Symbol: rfaD
• ID: 5355102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 1828239
• End bp: 1829231
• Gene Length: 993 bp
• Protein Length: 330 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640810846
• Product: ADP-L-glycero-D-mannoheptose 6-epimerase
• Protein accession: YP_001347176
• Protein GI: 152988535
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0451] Nucleoside-diphosphate-sugar epimerases
• TIGRFAM ID: [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCA TCGTCACCGG CGCCGCCGGC TTCATCGGCA GCAATCTGCT GCAGGCGCTG 
AACCAGCGCG GCGAGACCGA CATCATCGCG GTGGACGATC TCACCGACGG CGAGCAGTTC 
CGCAACCTGG CGGACGCCGA TATCGCCGAC TACCTGGACC AGAACGACTT CATCGAACGC 
TACGCCCGTG GCGACTTCGG TCCTGTGCGC GCGCTGTTCC ACCAGGGGGC CTGCGCCAGC 
ACCCTGGAAA GCAACGGGCG CTACATGATG GAGAACAACT ACCGCTACAG CTGTCGCCTG 
CTGGAGGCCA GCCTGGAACT CGGCGTGCCG TTCCTCTACG CCTCGTCGGC GGCGGTCTAC 
GGCGCCGGCC GGACTTTCCG CGAGGCGCGC CGGTACGAGC GGCCGCTGAA CGTCTACGGC 
TACTCCAAGT TCCTCTTCGA CCAGCGCGTG CGCCGGGCGC TGCCGCAGGC GCGCAGCCAG 
GTGGTCGGCC TGCGCTACTT CAACGTCTAC GGTCCGCGCG AGGGGCACAA GGGGCGGATG 
GCCTCGGTGG CCTACCACTG CTACCAGCAG CTGCGCCGCG ACGGGCGGGT GGTGCTGTTC 
GGCGAACATG ATGGCTTCCC GGCCGGCGGC CATCTGCGCG ACTTCGTCGC GGTGGAGGAC 
GTGGCGCGGG TCAACCTGCA TTTCCTCGAC CACCCGCAGC GCTCGGGCAT CTTCAACCTC 
GGCAGCGGCC GCGCGCGCAG CTTCAACGAA GTCGCCCTGG CGGTGATCAA CAGCGTTCGT 
GCCAGCGCCG ACCAGCCGCC GCTGGTGCTG GCGCAGGCGC TGGAGAGCGG CCTGCTCGGC 
TACCGCGAAT TCCCCGAGGC GTTGCGCGCG CGCTACCAGA GCCATACCTG CGCCGACCTG 
GAACTGCTTC GCGAGGCGGG TTACCGCGAC GATTTCCTCA GTCTGGAGGA GGGCGTCGGC 
GGGTACTGCC GCTGGCTGGC GCGCAGCGCC TGA 

 

Protein sequence

MSIIVTGAAG FIGSNLLQAL NQRGETDIIA VDDLTDGEQF RNLADADIAD YLDQNDFIER 
YARGDFGPVR ALFHQGACAS TLESNGRYMM ENNYRYSCRL LEASLELGVP FLYASSAAVY 
GAGRTFREAR RYERPLNVYG YSKFLFDQRV RRALPQARSQ VVGLRYFNVY GPREGHKGRM 
ASVAYHCYQQ LRRDGRVVLF GEHDGFPAGG HLRDFVAVED VARVNLHFLD HPQRSGIFNL 
GSGRARSFNE VALAVINSVR ASADQPPLVL AQALESGLLG YREFPEALRA RYQSHTCADL 
ELLREAGYRD DFLSLEEGVG GYCRWLARSA