Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1687 |
Symbol | |
ID | 5354217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1730822 |
End bp | 1731160 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640810740 |
Product | type III effector HopPmaJ |
Protein accession | YP_001347071 |
Protein GI | 152983598 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCTGA CCGATTTCCG CGCGCGCCTG CGCAGCGAGC AGCACCTGTT CACCGATACC CTGGCGTTCA TCGCCGAGCA CTACAGCTAC ACGCCGAGCG CCTTCGACAA CGGCAGCGTG AGCAACCCGG CCGGGCAGAA CGAAGGTTCC TGCAAGACCC TGGGCTTCGC CATCCTCGAA GGCCTGAGCC TCGAGGAAAC CCTGCTGGCC TTCGGTGAGC ACTACCGCGC GGTACGCGAA AACCCGGAAG GCGATGACCA CGCCAACATC CGCGCCCTGC AACAGACCGG CCTGGCCGGC GTGCATTTCG AGCGCCAGCC GCTATCGCGC CGGGGCTGA
|
Protein sequence | MTLTDFRARL RSEQHLFTDT LAFIAEHYSY TPSAFDNGSV SNPAGQNEGS CKTLGFAILE GLSLEETLLA FGEHYRAVRE NPEGDDHANI RALQQTGLAG VHFERQPLSR RG
|
| |