| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1672 |
|---|
| Symbol | |
|---|
| ID | 5357906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1716067 |
|---|
| End bp | 1717701 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640810725 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001347056 |
|---|
| Protein GI | 152984862 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.122846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAC CTGGAAAAGC GGATGGCGCA TTTTACGGGG CTTTGCCCGC CGGCGGCGAG
GCGCTGCGCG AAGATGCCGC GCCGCGCGCA GACAGCCGCA CGCCGATCCG CTACCTTGAA
GGACTCAGGA TAAGGGAGAC CTTCATGTTC GAATCCGCGG AAGTTGGCCA CAGCATCGAC
AAGGACACCT ACGAAAAGGC CGTCATCGAG TTGCGCGAAG CGCTGCTCGA GGCTCAGTTC
GAACTCAAGC AGCAGGCGCG CTTCCCGGTG ATCGTCCTGA TCAACGGCAT CGAGGGCGCC
GGCAAGGGCG AGACGGTCAA GCTGCTCAAC GAGTGGATGG ACCCGCGCCT GATCCAGGTG
CAGAGCTTCC TCCGTCCCTC CGACGAGGAG CTCGAGCGGC CGCCGCAGTG GCGCTTCTGG
CGGCGCCTGC CGCCGAAGGG GCGGATCGGC ATCTTCTTCG GCAACTGGTA CAGCCAGATG
CTCTACGCGC GGGTCGAGGG TCACATCAAG GAGTCCAAGC TGGACCTGGC CATCGACGCC
GCCGAGCGCT TCGAGCGGAT GCTCTGCGAC GAAGGCGCGC TGCTCTTCAA GTTCTGGTTC
CACCTCTCCA AGAAGCAGCT CAAGGAACGT CTCAAGGCCC TGGAGAAAGA TCCGCTGCAC
AGCTGGAAAC TGAGTCCGCT GGACTGGAAG CAGAGCGAGG TCTACGACAG ATTCGTGCAC
TACGGCGAGC GCGTGCTGCG CCGCACCAGC CGCGACTACG CGCCCTGGTA CGTGGTGGAG
GGCGCGGACG AGCGCTACCG CGCGCTGACC GTCGGCCGCA TCATCCTCGA AGGACTGCAG
GCCGCGCTGG CCACCAAGGA GCGCGCCAAG CGCCAGCCGC ACGCCGCGCC GCTGGTGTCG
AGCCTGGACA ACCGCGGCCT GCTGGACTCG CTGGACCTGG GCCAGTACCT GGACAAGGAC
GACTACAAGG AACAGCTCGC CACCGAGCAG GCGCGCCTGG CCGGGCTGAT CCGCGACAAG
CGCTTCCGCC AGCATTCGCT GGTGGCGGTG TTCGAGGGCA ACGACGCGGC CGGCAAGGGG
GGCGCCATTC GCCGCGTCAC CGATGCGCTG GACCCGCGCC AGTACCATAT CGTGCCGATC
GCCGCGCCGA CCGAGGAGGA GTGCGCGCAG CCCTATCTCT GGCGCTTCTG GCGGCACATC
CCGGCGCGCC GCCAGTTCAC CATCTTCGAC CGTTCCTGGT ACGGCCGCGT GCTGGTGGAG
CGCATCGAGG GCTTCTGCAC CCCGGCCGAC TGGCTGCGCG CCTATGGCGA GATCAACGAC
TTCGAGGAGC AGCTCAGCGA GTACGGGATC ATCGTGGTGA AGTTCTGGCT GGCGATCGAC
AAGCAAACCC AGATGGAGCG CTTCAAGGAA CGCGAGAAGA CCCCCTACAA GCGCTACAAG
ATCACCGAGG AAGACTGGCG CAACCGCGAC AAGTGGGACC AGTACGTCGA CGCGGTGGGC
GACATGGTCG ACCGCACCAG CACCGAGATC GCGCCCTGGA CCCTGGTCGA GGCCAACGAC
AAGCGCTTCG CCCGGGTCAA GGTGCTGCGC ACCATCAACG ATGCCATCGA GGCGGCGTAC
AAGAAGGACA AGTGA
|
|---|
| Protein sequence | MEEPGKADGA FYGALPAGGE ALREDAAPRA DSRTPIRYLE GLRIRETFMF ESAEVGHSID
KDTYEKAVIE LREALLEAQF ELKQQARFPV IVLINGIEGA GKGETVKLLN EWMDPRLIQV
QSFLRPSDEE LERPPQWRFW RRLPPKGRIG IFFGNWYSQM LYARVEGHIK ESKLDLAIDA
AERFERMLCD EGALLFKFWF HLSKKQLKER LKALEKDPLH SWKLSPLDWK QSEVYDRFVH
YGERVLRRTS RDYAPWYVVE GADERYRALT VGRIILEGLQ AALATKERAK RQPHAAPLVS
SLDNRGLLDS LDLGQYLDKD DYKEQLATEQ ARLAGLIRDK RFRQHSLVAV FEGNDAAGKG
GAIRRVTDAL DPRQYHIVPI AAPTEEECAQ PYLWRFWRHI PARRQFTIFD RSWYGRVLVE
RIEGFCTPAD WLRAYGEIND FEEQLSEYGI IVVKFWLAID KQTQMERFKE REKTPYKRYK
ITEEDWRNRD KWDQYVDAVG DMVDRTSTEI APWTLVEAND KRFARVKVLR TINDAIEAAY
KKDK
|
|---|
| |