| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1665 |
|---|
| Symbol | |
|---|
| ID | 5356316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1704742 |
|---|
| End bp | 1707498 |
|---|
| Gene Length | 2757 bp |
|---|
| Protein Length | 918 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640810718 |
|---|
| Product | putative sensor/response regulator hybrid |
|---|
| Protein accession | YP_001347049 |
|---|
| Protein GI | 152985475 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.879832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAC TCTGCCTGGT CCTGCTGTTG CTCTGCTGCG CGCTGCCGGT CCGGGCGCAG
CCGCCGGCGC CGCTGGACGG AGAGGACCTG CGCCTGTCCC TGGGCGAGTA CGCCGAGTAC
TACCGCGACA CCGGCGGCAA GGCGCGCCTG GATGACATCC TCGCCTTGCC GGCCCAGGCC
TTCGCATCCC TGCATGGCGA CCACGCGAAC TTCGGCAAGA ACGCCGCGGC CTGGTGGTTC
AGGGTGCGCC TGGACAACCG CAACGGCGCC GACCTGGCTG GCTTCCTGGA AGTCAACTAC
CCGCTGCTGG ACGACCTCAA GGTCTACCTG CTGACCGCCG ACGGGCGCAT CGAGCAGCAG
GAGAGCGGCG ACCTGTTCGC CTTTTCCCAG CGCCCGGTGC AGGTGCGCAA CTTCTGGTTC
CCGCTGCGAC TGCCGCCCGG CGAGAGCACC CTGCTGCTGC GCGTGCAGAC CACCAGCACC
GTCTACGTTC CGCTGTACTT CGCCACCTAC TCCGCCAGCG CGGCCAGCCA GGAGATCCTG
ATGGGCTTCA ACGGGGCCTT CTACGGCGTG CTGTTCGGGC TGTTCTGCTA CAACCTGTTC
CTGTTCGTCT CGCTGCGCGA GGCGACCTAT GCCTGGTACC TGCTCTACAA CCTCAGCCTC
GGCCTGTTCT CCGCCAGCTT CGACGGCCTG CTGTTCAGGC TGCTGCCCGG ATACGTGGCG
CTGGAGTCGG CCGGCATCTA CCTGCTGATG TACCTCAGTT GCCTGGTGTC GATCCAGTTC
AGCCGCGGCT ACCTCTACAC CCGCCGCGAC TTCCCGCACC TCGACCGCGT CCTCCGCGGC
CTGCTGCTGG CCTGCGTGGT ACTGCTGGCC AGCGAGCCGC TGGTGGGGCT GCGCGCCTGG
AACGTCCTCG CCAGCCTGAC GGTGATGCTG GTATCCCTCA GCCTGCTGCT GGCCGGCGGC
CACGTCTGGC GCCAGGGCCT GCGCTACGGC CTCTACTACA TCCTGGCCTG GGGCGCGCTG
CTGCTGTCGT TCCTGGTCAC CACCGCCGCC TCGCTGGGCT TCGAGCTGTT CGGCCTGTTC
GGCAGCGGCG TGGTCAAGGT CGGCATGACC GTGGAGCTGG TGACCCTATC CATCGGCCTC
GCCGACCGCA TCAACGCGCT CAAGGAGGAA GGCTTCCGCT CGCGCCAGGC GGCCGAGCAG
GCACGAGTGG AGAACGAGGC GAAGAGCCGC TTCCTGGCGA AGATGAGCCA TGAGATCCGC
ACCCCGCTGA ACGGCGTGCT GGGCATGCTG CAACTGCTCC GCGACACCCC GCTGGACCGC
GGCCAGGCGG CCTGCGTGGA GACCATCGCC AGCTCCGGCA ACGCACTGAT GTCGGTGATC
AACGATATCC TCGACTACGC CCGCATCGAG TCCGGCAAGC TGCAGTTGGA ACGCATCGAC
TTCGACCTGG AGGAACTGCT CTCCGACACC CTCGCCCTGT TCGGCGCCCA GGCCCGGGAG
AAACGCCTGC GCCTGCACCT GGGCCTGGAC AGGGGCGTGC CGCGCCGCCT CAACGGCGAC
CCGACGCGGC TGCGCCAGGT ACTGACGAAC CTGCTCGGCA ACGCCCTCAA GTTCACCGCC
GAAGGCCATG TCGCCCTGCG CGTGCAGCGG CGCTTCGACG AGGCCGGGCG CGAGCGCCTG
CTCTACAGCG TCAGCGACAG CGGCATCGGG ATTTCCGCCC AGGCGCAGGC GACCCTGTTC
GAGTCCTTTT CCCAGGCCGA CTCCAGCACC ACCCGCCGCT ACGGCGGCAG CGGCCTGGGG
CTGGCGATCA GCCGCGAACT GGTGCAGATG ATGGGCGGGC GCATCGAGGT GAGCAGCGAA
CCCGGCAAAG GCACCCGGTT CAGCGTCGAC CTGCCGCTCA GCCCCGCCCT CGACAGCGGC
GATGCGGATG AACTGGTGCA CCTGCTGCAA GGTCGCCCGG TCCTGCTGGC CAGCGAGGAC
AACCTGACCC TGGACTGTCT GCAGGCAACG CTGGAGCGCT GGGGGCTGCG AGTCGAGCGC
TGTCTCCAGC CACGGCGGCT GAACGCCTAT CTCGAGGACT TCAGTGCGCC CCCCCTGCTG
GTGCTGGCGG CGCCCTGGCC GGGTCCGCCG TCGATCTGGC TGGACTCCCT CTACGCACAG
CTGGAACAAG GCCAGCGCAT CCTCCTGCTG TGTCCGCCGC AGCACTGCCA CGACCTGCCG
CCGCACGAGG GCCTGCGCCT GCTGGCGCTG GCCCAGCCAG TGACGGTGAA TGCCCTGCGC
GCAGCGCTGC TGGAGCTGTA CCGGGAACGC CGCCGGCAGC TACGAGGCAA CAGCGAGGCG
CCCCGGGAAC CAGAGCGGGA CACCCCATGC ATCCTGGTGG CCGAGGACAA CCCGGTGAAC
CAGCTGGTGG TACGCGGCTT CCTCGCCAAG CGCGGCTATG CGGTGCGCCT GGCCGGCAAC
GGCCGGCTGG CGCTGGACGA GTACCTGCGC GACCCGAACG GTATCCAGCT GATCCTGATG
GATGGCGAGA TGCCGGAAAT GGACGGTTTC GAGGCGACCC GCCTGATCCG TCGGGAAGAG
CGCGCCCGGG ACTGGCCACG GGTACCGATC GTCGCCCTGA CCGCGCACAT ACTCGACGAG
CACCGCCAGG CCGGGATCGA GGCCGGCATG GACGCCTACC TCGGCAAGCC GGTGGACCGG
ACGGAACTCT ACGCCACCCT CGAACGCCTG CTCGGCCAGC CCTCGCGCCA GGCATGA
|
|---|
| Protein sequence | MSRLCLVLLL LCCALPVRAQ PPAPLDGEDL RLSLGEYAEY YRDTGGKARL DDILALPAQA
FASLHGDHAN FGKNAAAWWF RVRLDNRNGA DLAGFLEVNY PLLDDLKVYL LTADGRIEQQ
ESGDLFAFSQ RPVQVRNFWF PLRLPPGEST LLLRVQTTST VYVPLYFATY SASAASQEIL
MGFNGAFYGV LFGLFCYNLF LFVSLREATY AWYLLYNLSL GLFSASFDGL LFRLLPGYVA
LESAGIYLLM YLSCLVSIQF SRGYLYTRRD FPHLDRVLRG LLLACVVLLA SEPLVGLRAW
NVLASLTVML VSLSLLLAGG HVWRQGLRYG LYYILAWGAL LLSFLVTTAA SLGFELFGLF
GSGVVKVGMT VELVTLSIGL ADRINALKEE GFRSRQAAEQ ARVENEAKSR FLAKMSHEIR
TPLNGVLGML QLLRDTPLDR GQAACVETIA SSGNALMSVI NDILDYARIE SGKLQLERID
FDLEELLSDT LALFGAQARE KRLRLHLGLD RGVPRRLNGD PTRLRQVLTN LLGNALKFTA
EGHVALRVQR RFDEAGRERL LYSVSDSGIG ISAQAQATLF ESFSQADSST TRRYGGSGLG
LAISRELVQM MGGRIEVSSE PGKGTRFSVD LPLSPALDSG DADELVHLLQ GRPVLLASED
NLTLDCLQAT LERWGLRVER CLQPRRLNAY LEDFSAPPLL VLAAPWPGPP SIWLDSLYAQ
LEQGQRILLL CPPQHCHDLP PHEGLRLLAL AQPVTVNALR AALLELYRER RRQLRGNSEA
PREPERDTPC ILVAEDNPVN QLVVRGFLAK RGYAVRLAGN GRLALDEYLR DPNGIQLILM
DGEMPEMDGF EATRLIRREE RARDWPRVPI VALTAHILDE HRQAGIEAGM DAYLGKPVDR
TELYATLERL LGQPSRQA
|
|---|
| |