| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1659 |
|---|
| Symbol | |
|---|
| ID | 5355273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1696570 |
|---|
| End bp | 1697898 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640810712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001347043 |
|---|
| Protein GI | 152984592 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.372862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCCA CATCCCTTCT CGATCAGCTC TCCGGATACT GGTCGGCGCT CGACCAGCAC
CCTATCCTCC ACGCCAGCCT GGCCTTCGGC CTGCTGCTGG TGGGCGCCCT GATCCTCGGC
CGGATCGCCC GCTACGTCGT TCTCTACGCG GTCAACCTGC TGGCCCGCCA GCCGGCGCTG
CACTGGTTCG GCGACCTGAT CCGCAACAAG GTGTTCCAAC GCCTGGCGCA GACCACCCCG
TCGCTGCTGG TGCAGTTCGG CCTGCCATGG ATTCCCGAGA TGCCGGACAA GGCCGCGCAT
TTCCTCGGTA ACCTGGCGCT GGCCTTCACC GTGCTGTTCC TGATCCTCGC CCTCACCGCG
CTGCTCAACG CCCTGCTGGA CATCTACGCG CGCACCGAGC ACGCCCGCAC CCGTTCGATC
AAGGGCTACG TACAACTGGC GAAGATCGCC GTGTTCGTGT TCGGCGCGAT CATCATCGTC
TCGATCATCA TCGACCGCTC GCCGCTCCTG CTGCTATCGG GCCTCGGCGC GATGTCGGCG
GTCCTCCTGC TGGTCTACAA GGACACCCTG ATGTCCTTCG TCGCCAGCGT GCAGCTGACC
AGCAACGACA TGCTGCGGGT CGGCGACTGG ATCGAGATGC CGCAGGTCGG CGCCGACGGC
GACGTGGTGG ACATCACCCT GTACACCGTG AAGGTGCAGA ACTTCGACAA GACCATCGTC
TCGGTGCCGA CCTGGCGCCT GATGTCCGAG TCGTTCAAGA ACTGGCGCGG CATGCAACAG
TCCGGCGGAC GGCGGATCAA GCGCGCGATC TACGTCGACT CCAGCCAGGT GCGTTTCCTC
GACGAGAAGG AAGAGCAACG CCTGGGCCAG GTGCGCCTGC TCACCGAGTA CATGGCGCGC
AAGCAGACCG AGTTGCAGGA ATGGAACGCC GCCAACGGCG GGGTCGCGCC GCTGGCCGCC
AACCGCCGCC GGCTGACCAA CATCGGCACC TTCCGCGCCT ATGCCCTGGC CTACCTGCAG
AACCACCCGG ACATCCACCA GGGCATGACC TGCATGGTCC GCCAGATGCA GCCGACCGCC
CAGGGCATCC CGCTGGAGAT ATACTGCTTC ACCCGCACCA CCGGCTGGAT CGACTACGAG
CGCATCCAGG GCGACGTGTT CGATTACCTG CTGGCGGTGA TGCCGGAGTT CGGCCTCGGC
GCCTACCAGC AGCCCAGCGG CCAGGACCTG CGCCAGGGCC TGCAGGGCAT GCTCGACGGA
CGTGAACCGG CGACGCGTTC GTTCGAGGCG CTGGCTTCGC CGAGCCGCAG CGACGAAGCC
ACCGTTTGA
|
|---|
| Protein sequence | MDSTSLLDQL SGYWSALDQH PILHASLAFG LLLVGALILG RIARYVVLYA VNLLARQPAL
HWFGDLIRNK VFQRLAQTTP SLLVQFGLPW IPEMPDKAAH FLGNLALAFT VLFLILALTA
LLNALLDIYA RTEHARTRSI KGYVQLAKIA VFVFGAIIIV SIIIDRSPLL LLSGLGAMSA
VLLLVYKDTL MSFVASVQLT SNDMLRVGDW IEMPQVGADG DVVDITLYTV KVQNFDKTIV
SVPTWRLMSE SFKNWRGMQQ SGGRRIKRAI YVDSSQVRFL DEKEEQRLGQ VRLLTEYMAR
KQTELQEWNA ANGGVAPLAA NRRRLTNIGT FRAYALAYLQ NHPDIHQGMT CMVRQMQPTA
QGIPLEIYCF TRTTGWIDYE RIQGDVFDYL LAVMPEFGLG AYQQPSGQDL RQGLQGMLDG
REPATRSFEA LASPSRSDEA TV
|
|---|
| |