Gene PSPA7_1649 details

Gene Information

• Locus tag: PSPA7_1649
• Symbol: rhlR
• ID: 5357611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 1688253
• End bp: 1688927
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640810702
• Product: transcriptional regulator RhlR
• Protein accession: YP_001347033
• Protein GI: 152989609
• COG category: [K] Transcription
• COG ID: [COG2771] DNA-binding HTH domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.458186
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACCGA TCCACGACAG CCAGGGCGTG TTTGCCGTCC TGGAAAAGGA AGTGCGTCGC 
CTGGGCTTCG ATTATTACGC CTATGGGGTG CGCCACACGA TTCCCTTCAC CCGGCCGAAG 
ACCGAGGTGC ACGGTACCTA TCCCAAGGCC TGGCTGGAAC GCTACCAGAT GCAGAACTAC 
GGGGCGGTCG ACCCGGCGAT CCTCAATGGC CTGCGCTCCT CGGAAATGGT GGTCTGGAGC 
GACAGCCTGT TCGACCAGAG CCGGATGCTC TGGAACGAGG CCCGCGACTG GGGCCTGTGC 
GTCGGCGCGA CCTTGCCGAT CCGTGCGCCG AACAACCTGC TCAGCGTGCT TTCGGTGGCG 
CGCGACCAGC AGAACATCTC CAGCTTCGAG CGCGAGGAAA TCCGCCTGCG GCTGCGCTGC 
ATGATCGAGC TGCTGACCCA GAAGCTGACC GACCTGGAGC ATCCGATGCT GATGTCCAAC 
CCGGTCTGCC TCAGCCACCG CGAGCGCGAG ATCCTGCAAT GGACCGCCGA CGGCAAGAGC 
TCGGGAGAAA TCGCGATCAT CCTGAGCATT TCCGAGAGCA CGGTGAACTT CCACCACAAG 
AACATCCAGA AGAAGTTCGA CGCGCCGAAC AAGACCCTGG CCGCAGCCTA CGCCGCCGCG 
CTGGGGCTTA TCTGA 

 

Protein sequence

MQPIHDSQGV FAVLEKEVRR LGFDYYAYGV RHTIPFTRPK TEVHGTYPKA WLERYQMQNY 
GAVDPAILNG LRSSEMVVWS DSLFDQSRML WNEARDWGLC VGATLPIRAP NNLLSVLSVA 
RDQQNISSFE REEIRLRLRC MIELLTQKLT DLEHPMLMSN PVCLSHRERE ILQWTADGKS 
SGEIAIILSI SESTVNFHHK NIQKKFDAPN KTLAAAYAAA LGLI