Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1634 |
Symbol | nth |
ID | 5358148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1672283 |
End bp | 1672921 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640810687 |
Product | endonuclease III |
Protein accession | YP_001347018 |
Protein GI | 152987876 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCG CCAAGCGCGC GGAGATCTTC CGCCGACTGC ACGAAGACAA CCCAGAACCC AGGACCGAAC TGGCCTACAC CACGCCCTTC GAACTGCTCA TCGCGGTGAT CCTCTCCGCC CAGGCCACCG ACGTCGGGGT GAACAAGGCC ACCGCGCGCC TCTACCCGGT GGCCAATACC CCGGAAGCGA TATACGCCCT CGGCGTCGAG GGGCTGTCGG AATACATCAA GACCATCGGC CTGTTCAACA GCAAGGCGAA GAACGTCATC GAAACCTGCA GGATCCTCAT CGAGAAGCAC GGCAGCCAGG TCCCGGACAA CCGCGAGGAC CTCGAGGCCC TGCCTGGCGT CGGGCGCAAG ACCGCCAACG TGGTGCTCAA CACTGCCTTC CGGCAACCGA CCATGGCGGT CGACACGCAT ATCTTCCGGG TCGCCAACCG CACCGGTATA GCGCCGGGAA AGAATGTGCT GGAAGTGGAA AAGAAACTGC TGAAGTTCGT GCCGCGCGAC TACCTGCTCG ACGCCCACCA CTGGTTGATC CTGCATGGCC GCTACGTCTG CAAGGCTCGC AAGCCACAGT GCGGAAGCTG CCGGATCGAG GACCTGTGCG AATACAGGCA CAAGACTTCC GACGATTGA
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Protein sequence | MNAAKRAEIF RRLHEDNPEP RTELAYTTPF ELLIAVILSA QATDVGVNKA TARLYPVANT PEAIYALGVE GLSEYIKTIG LFNSKAKNVI ETCRILIEKH GSQVPDNRED LEALPGVGRK TANVVLNTAF RQPTMAVDTH IFRVANRTGI APGKNVLEVE KKLLKFVPRD YLLDAHHWLI LHGRYVCKAR KPQCGSCRIE DLCEYRHKTS DD
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