| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1611 |
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| Symbol | |
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| ID | 5358144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1644810 |
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| End bp | 1647785 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640810664 |
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| Product | putative serine protease |
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| Protein accession | YP_001346995 |
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| Protein GI | 152986985 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA ACCGCCCTCG CCTCACCCCG TTGTCCACCG CACTGCTGCT GGGCGCCTGG
ATCGCCCAGC CGGCCACGGC CGCCTATGTC GAAACCGGCC GGCCCGGCGA CCCGGCCAGC
TGGCGCTCCG CCGAATACCA GCAGGATTGG GGCCTGGAAC GGATGCGGGC CGAGCAGGCC
TACGCCGCCG GTATCGACGG CCAGGGCGTG AAGATCGGCG AGATGGACTC CGGCTTCGAC
CCGAGCCATC CGGATACCCC CGCCTCGCGC TACCAGCCGG TGACGGCCAG CGGCACCTAT
GTCGACGGCA CGCCGTTCAG CGTCAGCGGC GTGATGAACG GCAACAACGA CTCCCACGGC
ACCCATGTCG GCGGCACCCT CGGCGCCTCG CGCGACGGCG TCGGCATGCA TGGGGTGGCC
TACGCGGCGC AGGTGTTCGT CGCCAACACC AACCAGAACG ACAGCTTCCT GTTCGGCCCG
ACGCCCGACC CGAACTATTT CGAGGCCGCC TACCAGGCGC TGGCCGACGC CGGGGTGCGG
GCGATCAACA ACAGCTGGGG TAGCCAGCCC AAGGATGTCA GCTACGAGAC CCTCGACGGC
CTGCACGCCG CCTATGCCCA GCACTACGGC CGGAGCACCT GGCTGGACGC CGCCGCCGGC
GTCTCCCGCC AGGGCGTGAT CAACGTCTTC AGCGCCGGCA ACAGCGGCTA CGCCAACGCC
AGCGTGCGCT CCGCCCTGCC CTACTTCCAG CCGGACCTGG AAGGCCACTG GCTGGCCGTG
TCCGGCCTCG ACCAGCAGAA CGGCCAGCGC TACAACCGCT GCGGCATCGC CAAGTACTGG
TGCGTCACCA CGCCCGGGCG GCTGATCAAC AGCACCATGC CCGGCGGCGG CTACGCCAAC
AAGTCCGGTA CCTCGATGGC CGCGCCCCAC GCCACCGGCG CGCTGGCCCT GGTCATGCAG
CGCTATCCGT ACCTGAGCAA CGAGCAGGCG CTGCAGGTCC TGCTGACCAC CGCCACCCAG
CTCGACGGCA CGCCGACCCG CGCGCCCACC GACACCGTCG GCTGGGGCGT GCCGGATCTC
GGCCGGGCGA TGCATGGGCC TGGACAATTG CTCGGCCGCT TCGAGGCCAA CCTCCCGGCG
GGCCTGCGCG ACGAATGGAG CAATTCGATT TCCGATAGCG CCCTGCTCCA GCGCCAGGCC
GAGGACGCCG CCGAGCGCGC GGCCTGGCAG CGAACCCTGA AGGACAAGGG CTGGGAAAAC
GGCCTGCCGG CAAATGCCAG CCAGCAGGAG CGTACCGACT ACGCCATCGG CATGGCTCGC
GACCGGGCCG CCGCCCAGCG CCAGTACCAG GGCAGCCTGG TCAAGTCCGG TGCAGGCAGC
CTGGTCCTCA GCGGCGAAAA CACCTATCGC GGGCCGACCC TGGTCGACGG CGGTTCGCTC
AGCGTCGAGG GTTCGCTGCT GTCCGCCGTC GAGGTCGATG CCGGCGGCAC CCTCGGCGGC
AACGGCAGGA TCGGCGGCCT GCTGGCGCGC TCCGCCGGCA CGGTGGCGCC GGGCAACTCC
ATCGGCACCC TGGAGGTCGC CGGCGACCTG CGCTTCGAGC CGGGCTCGAC CTACGCGGTG
GAACTGTCGG ACAGCGCCAG CGACCGCATC GTCGCCAGCG GCAAGGCGAG CATCGCAGGC
GGCGATGTCA CCCTGGCCAT GGAGAACAGT CCCGATCTGC TCAGCCAGGC CCAGGTCGAG
AGCCTGGTCG GCCGCCGCTA CGACATCCTC GACGCCGCCG GCGGCATCGA CGGGCGCTTC
GCCGCGGTGT TGCCGAACTA CCTGTTCCTC GGCGGCACCC TGGACTACAC GGCCAACGCC
ATCCGCCTGG ATATCGGACG CAACGGCACC GCCCTCGCCA GCGTCGCGCA GACGCCCAAC
CAGGCGGCGG TCGCCGGCGC CATCGAGGCG CTCGGTGCAG GCAACCCGGT CTATGAAAGT
CTGCTTCTGT CGGAAAACGC CGCAAGCGCC CAACGGGCCT TCCAGCAATT GTCCGGGGAA
ATCTATCCGG CGCTCGCCGG CCTGCTGCTC AACGACAGCC GCTATCTGCG CGACAGCGTC
GGCGAACGCC TGCGCCAGGC CAGCGACGCG CCCGACGGCG AGCGCCCCGA AGGCTGGTTC
AAGGCGCTCG GCTCCTGGGG CAAGAGCGCC GACGGCAGCC ATGGCAGCGA AGGCTACCGC
CACTCGGTCG GCGGCTTCCT GCTCGGCGTC GACAGCCAGG TCGCCAGCGA CACGCGCCTC
GGCCTGGTGG CCGGCTACAG CAACAGCTCG CTGAACATGG ACAGCAGCCT GCAATCCTCC
GCCAGCATCG ACAGCTACCA CCTCGGCGCC TATCTCGGCC GGCAATTGCA GCAATGGCGC
CTGAGCCTGG GCGCGGCGCA CGCCTGGCAC CGCGCCGAGG TCAAGCGCGA CCTGCAATAC
GGCGCCGTGG CCGGCAAGCA GAAGGCCAAG CTCGACGCAC AGAGCAACCA GCTGTTCGCC
GAGGCCGCCT ACGCGCTGGG CTGGCGCACG CTGGAGCTGG AACCCTTCGC CGGGCTGGCC
TATGTGAACG TCGCCAGCGA CGGCTTCCAC GAACGCGGTA GCGCCGCGGC GCTGAAGGGC
GGCGACGACA ACCTCGATGC CGCCTTCACC ACCCTGGGCC TGCGTGCGAA GCGGCATTTC
GAGCTGGATG CCGAACGCCG CCTGGCGCTC TCCGGTACCC TCGGCTGGCG CCACAACCTC
AGCGACACAA CCCCGCAACG CCACCTGGCC TTCGCCAGCG GCGGCCAGCC GTTCAGCGTG
GAAAGCGTGG CCCTGTCGCG CGATGCCGCG CTGCTCGGCG TCGATGCCAG CCTCGCGGTG
AACCGCGAGG TGAGCGTGAG GCTGGGTTAC AACGGCCTGC TCGGCAGCCG CGAGAAGGAC
CACGGCATCG GCCTGACGGT CGACTGGCGC TTCTGA
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| Protein sequence | MTDNRPRLTP LSTALLLGAW IAQPATAAYV ETGRPGDPAS WRSAEYQQDW GLERMRAEQA
YAAGIDGQGV KIGEMDSGFD PSHPDTPASR YQPVTASGTY VDGTPFSVSG VMNGNNDSHG
THVGGTLGAS RDGVGMHGVA YAAQVFVANT NQNDSFLFGP TPDPNYFEAA YQALADAGVR
AINNSWGSQP KDVSYETLDG LHAAYAQHYG RSTWLDAAAG VSRQGVINVF SAGNSGYANA
SVRSALPYFQ PDLEGHWLAV SGLDQQNGQR YNRCGIAKYW CVTTPGRLIN STMPGGGYAN
KSGTSMAAPH ATGALALVMQ RYPYLSNEQA LQVLLTTATQ LDGTPTRAPT DTVGWGVPDL
GRAMHGPGQL LGRFEANLPA GLRDEWSNSI SDSALLQRQA EDAAERAAWQ RTLKDKGWEN
GLPANASQQE RTDYAIGMAR DRAAAQRQYQ GSLVKSGAGS LVLSGENTYR GPTLVDGGSL
SVEGSLLSAV EVDAGGTLGG NGRIGGLLAR SAGTVAPGNS IGTLEVAGDL RFEPGSTYAV
ELSDSASDRI VASGKASIAG GDVTLAMENS PDLLSQAQVE SLVGRRYDIL DAAGGIDGRF
AAVLPNYLFL GGTLDYTANA IRLDIGRNGT ALASVAQTPN QAAVAGAIEA LGAGNPVYES
LLLSENAASA QRAFQQLSGE IYPALAGLLL NDSRYLRDSV GERLRQASDA PDGERPEGWF
KALGSWGKSA DGSHGSEGYR HSVGGFLLGV DSQVASDTRL GLVAGYSNSS LNMDSSLQSS
ASIDSYHLGA YLGRQLQQWR LSLGAAHAWH RAEVKRDLQY GAVAGKQKAK LDAQSNQLFA
EAAYALGWRT LELEPFAGLA YVNVASDGFH ERGSAAALKG GDDNLDAAFT TLGLRAKRHF
ELDAERRLAL SGTLGWRHNL SDTTPQRHLA FASGGQPFSV ESVALSRDAA LLGVDASLAV
NREVSVRLGY NGLLGSREKD HGIGLTVDWR F
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