| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1600 |
|---|
| Symbol | algG |
|---|
| ID | 5354930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1631125 |
|---|
| End bp | 1632744 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640810653 |
|---|
| Product | alginate-c5-mannuronan-epimerase AlgG |
|---|
| Protein accession | YP_001346984 |
|---|
| Protein GI | 152984914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.911541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTC CCCTTTCGAC CTCCCATCGC CGGCTGCGGC CGCTGGCCGC GGCAGTGCTC
GGCGCGTTGC TGCTGCACGG CCAGGCGTGG GCGGCGCAGC CGCTGGAGAA ACCGCAACCG
GCCCCGGCGC AGGCCGGCAA CGAGCCGGGC CTGACCCAGG GCCTGAAGGA AACCGGCAAC
TACACGGTGA CCGCCGCGCC AGCCGAGCCG CTGCACCTGG ATCCGCCGAA GCTGCCCGAC
CTCTCCGGCT ACACCGCCGC CGCGGTGGAA GCCAGGATCG TGCGCAAGCC GGGTGGCCGC
GCCAGCGTGC AGCGCATGGT CCAGCAGCAG CCGCTGAAGG AGTTCACCGG TGGCAGCAAC
CGCCTCGCCG AGTGGGTCAA GCGCCAGCGC CAGATGCCCC AGGCGATCTT CATCGAAGGC
GGCTACGTGA ACCTCGCCCA GCTCGCCGGC AAGCTTCCCG CCAGCGCGCT GGAACAGGTC
GAGCCGGGGG TGTTCGTCGC CCGCCTGCCG ATCGTGGTCA GCCAGGGCGC GACCCTCGAC
ATCGACAAGC AGGTCAGGGA ACTGCGCCTG TCCCAGGAGC GCGGCGCGTT CCTGGTCAAC
GACGGCATGC TGTTCGTCCG CGACAGCAAG GTCACCGGCT GGAGCGAATC GAAGAAGGAG
CCGGCCTGGT TCAGGACCCC CGACGAGTTC CGGCCGTTCC TGATCTCCTG GGGCGGTGCC
GAGGTGTACC TGAGCAACAG CACCTTCACC AGCTTCGGCT ACAACGCCTC GAAGGCCTAC
GGCATCTCCA TCTCGCAGTA CAGCCCGGGC ATGGACAAGC AGATGAAGCG CCCGCGGCCC
AAGGGCTGGG TGATCGACTC GACCATCGTC GACAGCTGGT ACGGCTTCTA CTGCTACGAG
GCCGACGACC TGGTGGTGAA GGGCAACACC TACCGCGACA ACATCGTCTA CGGCATCGAC
CCGCACGACC GTTCGCATCG CCTGATCATC GCCGACAACA CCGTCCACGG GACGAAGAAG
AAGCACGGCA TCATCGTTTC GCGGGAGGTC AACGACAGCT TCATCTTCAA CAACCGCAGC
TACGAGAACA AGCTATCCGG GATCGTCCTC GACCGTAACA GCGAGGGCAA CCTGGTGGCC
TACAACGAGG TCTACCGCAA CCATTCCGAC GGCATCACCC TCTACGAGAG CGGCGACAAC
CTGCTCTGGG GCAACCAGGT CCTGGCCAAC CGCCGCCACG GCATCCGCGT GCGCAACAGC
GTGAACATCC GCCTCTACGA GAACCTCGCG GCGGGCAACC AGCTGATCGG CGTGTACGGC
CACATCAAGG ACCTCACCAA CACCGACCGC AACATCGCCC TCGACCCGTT CGACACCAAG
GTCTCGCTGA TCGTGGTCGG CGGCAAGCTC GCCGGCAACG GTTCCGGCCC GCTCTCGGTG
GATTCGCCGC TGAGCCTCGA ACTGTACCGG GTGGCGATGC TCGCCCCGAC CAAATCCTCC
GGCATCAGCC TGCCCGGCGT GCTCGGCGAG AAGCAGGACC AGATCCTCGA CCTGCTGGTG
CGCCAGGACA AGGCAGTGCT GATCGATCCC GTGGAAAGCC AGGCCGAACT CCAGGACTGA
|
|---|
| Protein sequence | MPTPLSTSHR RLRPLAAAVL GALLLHGQAW AAQPLEKPQP APAQAGNEPG LTQGLKETGN
YTVTAAPAEP LHLDPPKLPD LSGYTAAAVE ARIVRKPGGR ASVQRMVQQQ PLKEFTGGSN
RLAEWVKRQR QMPQAIFIEG GYVNLAQLAG KLPASALEQV EPGVFVARLP IVVSQGATLD
IDKQVRELRL SQERGAFLVN DGMLFVRDSK VTGWSESKKE PAWFRTPDEF RPFLISWGGA
EVYLSNSTFT SFGYNASKAY GISISQYSPG MDKQMKRPRP KGWVIDSTIV DSWYGFYCYE
ADDLVVKGNT YRDNIVYGID PHDRSHRLII ADNTVHGTKK KHGIIVSREV NDSFIFNNRS
YENKLSGIVL DRNSEGNLVA YNEVYRNHSD GITLYESGDN LLWGNQVLAN RRHGIRVRNS
VNIRLYENLA AGNQLIGVYG HIKDLTNTDR NIALDPFDTK VSLIVVGGKL AGNGSGPLSV
DSPLSLELYR VAMLAPTKSS GISLPGVLGE KQDQILDLLV RQDKAVLIDP VESQAELQD
|
|---|
| |