| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1562 |
|---|
| Symbol | glpF |
|---|
| ID | 5355151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1589318 |
|---|
| End bp | 1590157 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640810615 |
|---|
| Product | glycerol uptake facilitator protein |
|---|
| Protein accession | YP_001346946 |
|---|
| Protein GI | 152983524 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG CCGCCCCGAC CCCGTCCCTG TTCGGCCAAT GCCTGGCCGA GTTCCTCGGC
ACCGCCCTCC TCATTTTCTT CGGCACCGGT TGTGTCGCCG CCCTCAAGGT CGCCGGCGCA
AGCTTCGGCC TGTGGGAGAT CAGCATCATC TGGGGAGTCG GTGTCAGCCT GGGCATCTAC
CTCAGCGCCG GCGTCTCCGG CGCGCACCTG AACCCGGCGG TGAGCATCGC GCTATGGCTG
TTCGCCGGCT TCGAGGGGCG CAAGCTGCCG TTCTACATGG CCGCCCAGGT GGCCGGCGCG
TTCTGTGCGG CGGCGCTGGT CTACACCCTC TACAGCAGCC TGTTCGTCGA ATTCGAGCAG
GCGCAGCACA TCGTCCGCGG CAGCCAGGAC AGCCTGGCCC TGGCCTCGGT ATTCTCCACC
TACCCACACC CGGCGCTGTC GGTCGGCCAG GCGTTCCTCG TCGAGATGGT GATTACCGCG
ATCCTGATGG CGGTGATCAT GGCCCTTACC GACGACGGCA ACGGCCTGCC GCGCGGCCCG
CTGGCGCCGC TGCTGATCGG CCTGCTGATC GCCGTGATCG GCAGCGCCAT GGGCCCGCTG
ACCGGCTTCG CGATGAACCC GGCGCGCGAC TTCGGGCCCA AGCTGATGAC CTACCTGGCC
GGCTGGGGGC CCATCGCCTT CACCGGCGGC CGCGAGATTC CCTACTTCCT GGTGCCGATC
TTCGCGCCGA TCCTCGGTGC CTGCCTCGGT GCCGGCGGCT ATCGTGTACT GATCGCGCGC
CATCTGCCGA GCGCCGCGGC GCCGGCCGAC GCCGAGCCGG AGAAGGTTCG CGCTTCCTGA
|
|---|
| Protein sequence | MTTAAPTPSL FGQCLAEFLG TALLIFFGTG CVAALKVAGA SFGLWEISII WGVGVSLGIY
LSAGVSGAHL NPAVSIALWL FAGFEGRKLP FYMAAQVAGA FCAAALVYTL YSSLFVEFEQ
AQHIVRGSQD SLALASVFST YPHPALSVGQ AFLVEMVITA ILMAVIMALT DDGNGLPRGP
LAPLLIGLLI AVIGSAMGPL TGFAMNPARD FGPKLMTYLA GWGPIAFTGG REIPYFLVPI
FAPILGACLG AGGYRVLIAR HLPSAAAPAD AEPEKVRAS
|
|---|
| |