Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1545 |
Symbol | |
ID | 5358867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1569604 |
End bp | 1571016 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640810599 |
Product | MFS family transporter |
Protein accession | YP_001346930 |
Protein GI | 152987990 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCGCA CGCCCTCTCC CGAAGACGCC GCCCTGCACA CCAAGGCCCG CAGGGCCGGT ATCGCCTCGT TCATCGGCAC CACCATCGAA TGGTACGACT TCTACATCTA CGGCCTGGCC GCCGCCCTGG TGTTCGGCAG GGTGTTCTTC CCCGCCGACA TGGACCCCGG CCTGGCCACC CTGCTGTCCT TCGTCACCCT CTGGTCGGGC TTCATCGCTC GCCCGCTCGG CGGGATCATC TTCGGCCACC TCGGCGACCG CATCGGGCGC AAGACCACCC TGGTGATCAC CCTGGTCATG ATGGGCATCG CCACCACCTG CATCGGCCTG CTGCCGGTCT ATGCGCAGAT CGGCGTCTGG GCGCCGATCT CCCTGGTGGC GCTGCGTATC GTCCAGGGCA TCGCGGTCGG CGGCGAATGG GGTGGCGCGA TCCTGATCGC CAGCGAAAGC GCGCCCAGGG GCAAGGGCAT CCTCTACGCC GCCTTCGCCC AGCAGGGCTC GCCCACCGGC AACCTCCTGG CGACCCTGGT GTTCTTCGCC CTCAGCGCCC TGCCCGCCCC GGACTTCCTG CTCTGGGGCT GGCGCGCGCC GTTCCTGCTC TCGGCGGCGC TGGTCATCGT CGGCATGCTG ATCCGCCTGA AGCTGGAGGA GTCGGAAGAC ATGAAACGCG TGCTGGCGCA GAAGCGCACG GTGAAGCTGC CGCTCGCCGA GGTGCTGGGC AGGCACTGGA AGATCGTCCT GCTCGGCGCC GGCGTGCTGC CGATCATCCA TGTCACCTAC TTCAAGAGCA CCTTCGCCCT GTCCTGGGCG ACCAAGACCC TTGGCTACAG CCAGGGCGCC TTCCTCGGCA TCATCGTCAT CGCCCTGGTG GTGCAGTTCG TCAGCCAGCC CCTCGGCGCG CTGCTCACCT CGCGCATCGA CATGCGCAAG GCGGTGTGCC TGATGGTGCT GCCGGAGTTC ATCCTGATGC CGGCGATGTT CTTCGCCGTG GAAACCAGGA TCTACTGGAT CGCCGCCGTC GGCATGTGCC TGGCCACGGT GCCGCACGCG ATGTTCTACG GCGCGGTGGG CGGCATCCTC GCCCGCGCCT TCCCGGCGCG GGTGCGCTAC ACCGGCCTGT CGCTGGCCTA CCAGCTCTGC TCGCTGCTGG TCGGCGGCGG CACGCCGGTG CTGGCCCAGT GGATCCTCAA CGGCACCGGC AGCATCCTCG GCGTGGCCCT GGCCTCGGCC TGCTACGCGC TGGTCTCGCT GGCCTGCACC CTGGCCCTGC TGCGGATCAC CGGCTTCCAC GCCGGCGAGC TGTCAACCGC CGAACGCGCC GACGCCGAGG AGCTGCCGCA CCGCCCCGTG ACTCCCGGCC GCGAAGCGGC GCTGCGCACG CCGGCCCGGT TGCTCGGCGG CAACCCCGGC TAG
|
Protein sequence | MPRTPSPEDA ALHTKARRAG IASFIGTTIE WYDFYIYGLA AALVFGRVFF PADMDPGLAT LLSFVTLWSG FIARPLGGII FGHLGDRIGR KTTLVITLVM MGIATTCIGL LPVYAQIGVW APISLVALRI VQGIAVGGEW GGAILIASES APRGKGILYA AFAQQGSPTG NLLATLVFFA LSALPAPDFL LWGWRAPFLL SAALVIVGML IRLKLEESED MKRVLAQKRT VKLPLAEVLG RHWKIVLLGA GVLPIIHVTY FKSTFALSWA TKTLGYSQGA FLGIIVIALV VQFVSQPLGA LLTSRIDMRK AVCLMVLPEF ILMPAMFFAV ETRIYWIAAV GMCLATVPHA MFYGAVGGIL ARAFPARVRY TGLSLAYQLC SLLVGGGTPV LAQWILNGTG SILGVALASA CYALVSLACT LALLRITGFH AGELSTAERA DAEELPHRPV TPGREAALRT PARLLGGNPG
|
| |