| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1517 |
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| Symbol | rpoS |
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| ID | 5357043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1541843 |
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| End bp | 1542877 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640810570 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_001346901 |
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| Protein GI | 152985831 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTCGAA CTCATGCAAG GGATAACGAC ATGGCACTCA AAAAAGAAGG GCCGGAGTTT
GACCACGATG ACGAAGTGCT CCTCCTGGAG CCCGGCATCA TGCTGGACGA GCTGTCTGCC
GACGAGCAGC CTTCTCTCCG GGCAACTCCA AAAGCCACCA CCTCCTTCTC TTCCAAGCAA
CACAAGCACA TCGACTACAC GCGTGCGTTG GACGCAACGC AGCTGTATCT CAACGAAATC
GGTTTCTCGC CCCTGCTGAC GCCCGAAGAG GAAGTCCACT TCGCCCGTCT GGCGCAGAAG
GGCGATCCCG CTGGTCGGAA GCGGATGATC GAGAGCAACC TGCGACTGGT GGTGAAGATC
GCCCGGCGCT ATGTCAATCG CGGACTGTCC CTGCTCGACC TGATCGAGGA AGGCAACCTC
GGCCTTATCC GCGCCGTGGA GAAGTTCGAT CCGGAGCGCG GATTCCGGTT CTCGACCTAC
GCCACCTGGT GGATCCGCCA GACCATCGAA CGGGCCATCA TGAACCAGAC CCGGACCATC
CGTTTGCCGA TCCATGTGGT CAAGGAGCTG AACGTCTACC TGCGTGCGGC GCGGGAGCTG
ACCCACAAGC TCGACCACGA ACCGTCCCCC GAGGAAATCG CCAACCTGCT GGAAAAACCG
GTCGCCGAGG TCAAGCGCAT GCTCGGCCTG AACGAGCGGG TCACTTCGGT GGACGTTTCC
CTTGGCCCGG ACTCCGACAA GACCCTGCTC GACACCCTGA CCGATGATCG CCCCACCGAC
CCGTGCGAGT TGCTGCAGGA CGACGACCTC AGCGAAAGCA TCGACCAGTG GCTGTCGGAA
CTCACCGACA AGCAGCGTGA AGTGGTGATT CGCCGCTTCG GCCTGCGCGG GCATGAAAGC
AGCACGCTGG AGGAGGTCGG CCAGGAAATC GGCCTGACCC GCGAGCGGGT CCGCCAGATC
CAGGTGGAGG CACTCAAGCG TCTGCGCGAG ATATTGGAGA AGAACGGCCT GTCGAGCGAC
GCACTGTTCC AGTGA
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| Protein sequence | MSRTHARDND MALKKEGPEF DHDDEVLLLE PGIMLDELSA DEQPSLRATP KATTSFSSKQ
HKHIDYTRAL DATQLYLNEI GFSPLLTPEE EVHFARLAQK GDPAGRKRMI ESNLRLVVKI
ARRYVNRGLS LLDLIEEGNL GLIRAVEKFD PERGFRFSTY ATWWIRQTIE RAIMNQTRTI
RLPIHVVKEL NVYLRAAREL THKLDHEPSP EEIANLLEKP VAEVKRMLGL NERVTSVDVS
LGPDSDKTLL DTLTDDRPTD PCELLQDDDL SESIDQWLSE LTDKQREVVI RRFGLRGHES
STLEEVGQEI GLTRERVRQI QVEALKRLRE ILEKNGLSSD ALFQ
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