| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1513 |
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| Symbol | truD |
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| ID | 5355332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1538361 |
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| End bp | 1539428 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640810566 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_001346897 |
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| Protein GI | 152987273 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTC TCGGCGAGCT CGACCTGCTC GGACCGCGCG CCCACGGCGC GGCCTGCGGC
GAGGCGGTCT TGAAGGCGGT GGCCGAGGAT TTCCAGGTCG ACGAGGTGCT GGACATTCCC
CTCAGCGGTG AAGGCGAGCA CCTCTGGCTT TGGGTGGAAA AGCGCGGGCT GAACACCGAG
GAGGCGGCCC GACGCCTGGG CCGCGCCGCC GGTGTGCAGC AGAAGCATGT CAGCTATGCC
GGGCTGAAGG ACCGCCAGGC CCTGACCCGG CAATGGTTCA GCCTGCACCT GCCGGGCAAG
GCCGACCCCG ATCTGGGCGC AGCCGAGGGC GAAGACCTGC GGATCCTTCG CCGCACCCGT
CACTCGCGCA AGTTGCAGCG GGGCGCGCAT GCCGCCAACG GCTTCACCCT GCGCCTGACC
GCTCTTCGGG CGGAGCGCGT CCTTCTCGAC GCGCGACTCG AACGTATCGC CGCGGTCGGC
GTGCCCAACT ATTTCGGCCT GCAGCGCTTC GGCCATGGCG GCGGCAACCT GGTCGACGCG
CGCAGTTGCG CGGAGCAGGA CCTGCTGCCG GCGAATCGCA ACCTGCGTTC GCGCTTCCTT
TCCGCCGGGC GCAGCTACCT GTTCAATCGC CTGCTCGCCG AGCGGGTCGC GGAGGGTAGC
TGGAACCGGG CAGCGGTCGG CGACCTGCTG GCCTTCACCG ACAGCCGCAG CTTTTTCCTC
GCTGGCGAGG AAGAATGCCG CGATGCCCGT CTGGCCGCCC TCGACCTGCA CCCCACCGGC
CCGCTCTGGG GCGAGGGCGA TCCGCCGAGC GGCGCCGGCG TTCTCGAACG CGAGCTGGCC
CTGGCCGGGA GCGAGCCGGC GCTCTGCCGA TGGCTGGCGA AGGCGGGCAT GGCGCACGAA
CGGCGCATCC TGCGGCTCCC CATCCAGGGG CTGGCGTGGC ATTATCCCGA ACCTGATGTT
CTGCAACTGG AATTCGTCCT GCCGGCCGGT TGTTTCGCCA CCGTAGTGGT GCGTGAAATC
CTCGACCTGG TACCGACAGG GCAGACGGAA AACCCATGCG CATACTGA
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| Protein sequence | MSVLGELDLL GPRAHGAACG EAVLKAVAED FQVDEVLDIP LSGEGEHLWL WVEKRGLNTE
EAARRLGRAA GVQQKHVSYA GLKDRQALTR QWFSLHLPGK ADPDLGAAEG EDLRILRRTR
HSRKLQRGAH AANGFTLRLT ALRAERVLLD ARLERIAAVG VPNYFGLQRF GHGGGNLVDA
RSCAEQDLLP ANRNLRSRFL SAGRSYLFNR LLAERVAEGS WNRAAVGDLL AFTDSRSFFL
AGEEECRDAR LAALDLHPTG PLWGEGDPPS GAGVLERELA LAGSEPALCR WLAKAGMAHE
RRILRLPIQG LAWHYPEPDV LQLEFVLPAG CFATVVVREI LDLVPTGQTE NPCAY
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