| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1499 |
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| Symbol | dnaE |
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| ID | 5357805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1522079 |
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| End bp | 1525636 |
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| Gene Length | 3558 bp |
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| Protein Length | 1185 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640810552 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001346883 |
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| Protein GI | 152987648 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGTTTT TGCGTTATTT CTGCTCCGGG GCCTTCATGA CCGTATCCTT CGTTCACCTG
CGTCTGCATA CCGAATTCTC CCTGGTCGAC GGCCTGGTCC GGGTCAAGCC CCTGGCCAAG
GCGGTGGCGG GACTGGGCAT GCCGGCGGTG GCGGTCACCG ACCAGAGCAA CATGTGCTCG
CTGGTGAAGT TCTACAAGAC CGCCATGGGT GCCGGCATCA AGCCGATCTG CGGGGCCGAC
ATCTGGCTCG CCAGCCGCGA GGAAGACGGT CCGCTCAGCC GCCTGAGCCT GCTGGCGATG
AACGCCAGGG GCTACCGCAA TCTCACCGAG CTGATTTCCC GCGGCTGGAG CGAAGGCCAG
CGCAACGGCG AGATCATCAT CGAGCGCGAC TGGGTCAAGG CGGCGGCGGA GGGCCTGATC
GCGCTGTCCG CGGCCAAGGA AGGCGAGATC GGCCACGCGC TGCTCGACGG CGAGGAGGCC
AAGGCCGAGG CGCTGTTGCG CGAGTGGATG GAGGTGTTCC CCGAGCGCTT CTACGTCGAA
GTGCAACGTA CCAGCCGGGT CAACGACGAG GAGCACCTCC ACGCGGCGGT GGCTTTGGCG
TCACGCTGCA ACGCGCCGCT GGTGGCGACC AACGACGTGC GCTTCATCAG GCAGGAAGAC
TTCGAGGCCC ACGAGACCCG CGTCTGCATC GGCGAGGGGC GGACCCTCGA CGATCCGCGG
CGGCCGCGCA CCTATTCGGA CCAGCAGTAC CTGAAGTCGC CGGCGGAAAT GGCCGAGCTG
TTCAGCGACC TCCCCGAGGC ACTGGAGAAC ACCGTCGAGA TCGCCAAGCG CTGCAACATC
GAGGTGCAGC TGGGCAAGTA CTTCCTGCCG GACTTTCCCA CGCCCAATGG CATGGGTATC
GACGACTACC TGCGGCACGC TTCCTTCGAA GGCCTCGAGG AGCGCCTGGA GGTGCTGCTG
CCGAAGGATA CCCCGGACTA CGAGGCCAGG CGCCAGGTCT ACGTCGACCG TCTGAACTTC
GAGCTCGACA TCATCATCCA GATGGGCTTC CCCGGTTACT TCCTCATCGT GATGGACTTC
ATCAAGTGGG CGAAGAACAA CGGCGTGCCG GTAGGCCCCG GGCGGGGCTC GGGCGCCGGC
TCGCTGGTGG CCTACGTGCT GAAGATCACC GACCTCGACC CGCTGGCCTA CGACCTGCTG
TTCGAACGTT TCCTCAACCC GGAACGGATC TCCATGCCCG ACTTCGACGT CGACTTCTGC
ATGGAAGGCC GCGACCGGGT GATCGACTAC GTGGCCGATG CCTACGGGCG CAACGCGGTC
AGCCAGATCA TCACCTTCGG CACCATGGCG GCGAAGGCTG TGGTGCGCGA CGTGGCCCGG
GTCCAGGGCA AGTCCTACGG CCTCGCCGAC CGGCTGTCGA AGATGATCCC GTTCGAAGTC
GGCATGACCC TGGAAAAAGC CTACGAGCAG GAAGAAATGC TCCGCGACTT CCTCAAGAGC
GACGAGGAAG CCGCCGAAAT CTGGGAGATG GCCCTCAAGC TGGAAGGCAT CACCCGTGGT
ACCGGCAAGC ACGCCGGTGG CGTGGTGATC GCGCCGACCA AGCTGACCGA CTTCTCGCCG
ATCGCCTGCG ACGAGGAAGG CGGCGGCCTG GTGACCCAGT TCGACAAGGA CGATGTGGAG
GCGGCCGGCC TGGTGAAGTT CGACTTCCTC GGCCTGCGGA CCCTGACCAT CATCAAGTGG
GCGATGGAGA TCATCAACCG CGAACAGGCC AAGAAGGGCC TGGAACCGGT GAACATCGAC
TTCATCCCGC TGGACGACAA GCCGACCTAC GCGCTGTTGC AGAAAGCCGA GACCACCGCG
GTGTTCCAGC TCGAATCGCG CGGCATGAAG GAGCTGATCA AGAAGCTCAA GCCGGACTGC
CTGGAAGACC TCATCGCCCT GGTGGCGCTG TTCCGCCCGG GCCCGTTGCA GTCGGGCATG
GTGGACGACT TCATCAACCG CAAGCACGGC CGCGCCGAGC TGTCCTATCC GCATCCCGAC
TACCAGTACG CCGGCCTGGA GCCGGTGCTC AAGCCTACCT ACGGCATCAT CCTGTACCAG
GAACAGGTGA TGCAGATCGC CCAGGTCATG GCCGGCTACA CCCTCGGCGG CGCGGACATG
CTGCGCCGGG CCATGGGCAA GAAGAAGCCG GAGGAAATGG CCAAGCAGCG CGGTGGCTTC
ATCGAGGGCT GCAAGAACAA CGGCATCGAT GCCGACCTGG CGGGCAACAT CTTCGACCTG
GTGGAAAAGT TCGCCGGCTA CGGCTTCAAC AAGTCGCACT CGGCCGCCTA CGGCCTGGTC
TCCTACCAGA CCGCCTGGCT GAAGACCCAC TTCCCGGCGC CGTTCATGGC CGCGGTGCTC
ACCGCGGATA TGCAGAACAC CGACAAGGTG GTGACGCTGA TCGAAGAATG CCGGCACATG
AAGCTGCGTA TCGTCGCGCC GGACGTGAAC AACTCCGAGT TCCGCTTCAC CGTCGACGAC
GACGGCCGCA TCGTCTACGG CCTGGGTGCG ATCAAGGGCG TCGGCGAAGG GCCGGTGGAG
GCGATCACCG AGTGCCGCGC CGAAGGCGGG CCGTTCAACA CCCTGTTCGA CTTCTGCGAC
CGCGTCGACC TCAAGCGCAT CAACAAGCGC ACCCTGGAAG CGCTGATCCG CGCCGGCGCG
CTGGATCGCC TCGGGCCGCA CTACCACGAC GAGCTCAAGG CCTACCAGGC CACCGTCGAC
CTCAATCGCG CGGTGCTGCT GGCAGCGATG GAGGAAGCGA TCCAGGCCGC GGAGCAGACC
GCGCGCAGCC ACGACAGCGG GCACATGGAC CTGTTCGGCG GGGTCTTCGC CGAGCCGGAG
GCGGATGTCT ACGCCAACCA CCGCAAGGTC AAGGAGCTGA CCCTCAAGGA ACGCCTGAAG
GGCGAGAAGG ACACCCTCGG CCTGTACCTG ACCGGCCACC CGATCGACGA ATACGAAGGC
GAGGTGCGGC GCTTCGCCCG CCAGCGCATC GTCGAGCTGA AGCCGGCGCG CGATACCCAG
ACGGTGGCAG GGCTGATCGT CAACCTGCGG GTGATGAAGA ACAAGAAGGG CGACAAGATG
GGCTTCGTCA CCCTCGACGA CCGCTCCGGG CGGATCGAGG CCTCGCTGTT CTCCGAAGCC
TTCGCCGCGG CCCAGTCGCT GCTGCAGACC GACGCGCTGG TAGTGGTCGA GGGCGAGGTC
AGCCAGGATG ACTTCTCCGG CGGCCTGCGC CTGCGCGCCA AGCGCGTGAT GAGCCTGGAG
GAGGCGCGCA CCGGGCTGGC GGAGAGCCTG CGGATGAAAC TGCACGCCGA CCTGTTGAAG
GGCGACCGCC TGCGCTGGCT GGGCGAACTG TTCAACCGCC ATCGCGGTTC CTGTCCGATC
ACCCTGGACT ACACCAGCGC CGACGCCAAG GCCCTGCTGC AGTTCGGCGA GAGCTGGCGG
GTGGATCCGG CGGACGATCT GATCCAGGCA TTGCGTGACC AGTTCGGGCG CGACAACGTC
TTCCTCAATT ATCGTTAA
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| Protein sequence | MSFLRYFCSG AFMTVSFVHL RLHTEFSLVD GLVRVKPLAK AVAGLGMPAV AVTDQSNMCS
LVKFYKTAMG AGIKPICGAD IWLASREEDG PLSRLSLLAM NARGYRNLTE LISRGWSEGQ
RNGEIIIERD WVKAAAEGLI ALSAAKEGEI GHALLDGEEA KAEALLREWM EVFPERFYVE
VQRTSRVNDE EHLHAAVALA SRCNAPLVAT NDVRFIRQED FEAHETRVCI GEGRTLDDPR
RPRTYSDQQY LKSPAEMAEL FSDLPEALEN TVEIAKRCNI EVQLGKYFLP DFPTPNGMGI
DDYLRHASFE GLEERLEVLL PKDTPDYEAR RQVYVDRLNF ELDIIIQMGF PGYFLIVMDF
IKWAKNNGVP VGPGRGSGAG SLVAYVLKIT DLDPLAYDLL FERFLNPERI SMPDFDVDFC
MEGRDRVIDY VADAYGRNAV SQIITFGTMA AKAVVRDVAR VQGKSYGLAD RLSKMIPFEV
GMTLEKAYEQ EEMLRDFLKS DEEAAEIWEM ALKLEGITRG TGKHAGGVVI APTKLTDFSP
IACDEEGGGL VTQFDKDDVE AAGLVKFDFL GLRTLTIIKW AMEIINREQA KKGLEPVNID
FIPLDDKPTY ALLQKAETTA VFQLESRGMK ELIKKLKPDC LEDLIALVAL FRPGPLQSGM
VDDFINRKHG RAELSYPHPD YQYAGLEPVL KPTYGIILYQ EQVMQIAQVM AGYTLGGADM
LRRAMGKKKP EEMAKQRGGF IEGCKNNGID ADLAGNIFDL VEKFAGYGFN KSHSAAYGLV
SYQTAWLKTH FPAPFMAAVL TADMQNTDKV VTLIEECRHM KLRIVAPDVN NSEFRFTVDD
DGRIVYGLGA IKGVGEGPVE AITECRAEGG PFNTLFDFCD RVDLKRINKR TLEALIRAGA
LDRLGPHYHD ELKAYQATVD LNRAVLLAAM EEAIQAAEQT ARSHDSGHMD LFGGVFAEPE
ADVYANHRKV KELTLKERLK GEKDTLGLYL TGHPIDEYEG EVRRFARQRI VELKPARDTQ
TVAGLIVNLR VMKNKKGDKM GFVTLDDRSG RIEASLFSEA FAAAQSLLQT DALVVVEGEV
SQDDFSGGLR LRAKRVMSLE EARTGLAESL RMKLHADLLK GDRLRWLGEL FNRHRGSCPI
TLDYTSADAK ALLQFGESWR VDPADDLIQA LRDQFGRDNV FLNYR
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