| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1420 |
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| Symbol | |
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| ID | 5355023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1436301 |
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| End bp | 1439900 |
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| Gene Length | 3600 bp |
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| Protein Length | 1199 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640810473 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | YP_001346804 |
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| Protein GI | 152983965 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.293149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGGCA CTCGTCTCCT GCCAGGCGCG CGTCGCGGCG TTCGCCTTCT CGCCCGCCTG
GCGCTGTGCA TCCTGGCATC GCTGCCCTGG CAGGCGCCGC AGGCCAGCGC TGCCGCGCAG
GCGCAACCGG CCAGCCTGGC GCAGTTGCTG CGGATGCGCC AGAACCTGCC AGAACGCCCC
CTGCGCGTCG CCCAGGTGGC TCATCCGCCC GGACAGCAGG AAAGCAACGG CAGCCGGATA
CTCAACGGCA TCAGCGACGA CTACCTGCAG CTCATCGGTG ATTTCCTCGC CCTGCCGCTG
GAGCGCATCA CCTACCCTTC GGTGGAGGCT TCCTTCGCCG GACTGCGCAA CGGCGAGGTC
GACCTGCTGC CACGCGCCAG CGACTTCGAG CGGCACCTGC CGGGGCTGAT CTTCAGCCAT
CCGTACCTGA ACAGCACACC GATCATCATC GGCCGCAGCG ACGACCAGAG CCTGCCCCCC
GACCTTCAGG GCAAGCGCGT GCTGCTGCTC AACCACTACC TGCATCCGGA CACGGTCCGC
CAGGCCTATC CCGGGGCCAT CCTGGAAAGC GTCCGGGGCA CCGCCGCCGG TCTGCAGCGC
CTAGCCGAAG GCGGGGCCGA CGCCTTCCTC GGCGACAAGA CCCGGGCCAA CCGCTACATG
CTCCAGCGCC CCGACCTCAA GCTGCAGAAC AAATTCGCCG CCAACCTGCC CAGCGAGGGC
TTCGCCTTCG CCGCCCTGGC CTCGCGCCGA GACCTGGTCA CCCTCGTCGA CCATGTCCTG
GAAACCACCC CGGACACTCG CAAGCACGAG TTCCTGCAAC GCTGGACACC GTCGCGCCAG
CTGTTCGCGC CCGCCGACGC CTTCGCCCTC AGCCACGGCG AGCGCGAATG GTTGAAGAAA
AAGCAGCCCC TGCGCCTGAT CGCCCAGTCG GCGCCGCCCT ATTTCTTCCG CAACAGCCAC
GGCCAGTGGG ACGGGCTCGG CCTGGACGTG CTGCGCTACC TGTCCGATGC CTACGAGCTG
CCGCTGGAAA TCCTCGACGC CCAGTCGCCG GCGCAGGACC AGCGGCGCCT GGAGCGGGGC
GAGGCGCTGC TCGCCAGCAG CATTCCGCCC ACCCCGGAGC GCCGCCGCCG GCTGGCCTTC
AGCATGCCGT TCGGGGTCCA GGACTGGGCC TTCGTCATCC GCCGCCACGC CAGTTCGCCT
AGTTCGCTGG AGGCCATGGC CGGGCGTCGA CTGGCCATCG CCGGCAACCA TCCCCTGCGC
GACTACCTGG AAAATCGCTA CCCGCGGATC GACCTGGTCC TCACCGCCAG CGGCCACGAA
TCCTTTTCCC TGGTCGAAAG TGGCGAAGTG GACGCCACGC TGCAGAGCAT CCACAACAAT
CCCCGCTGGC TCCAGGAGCA CGGCCTGCGC CAGGGCGAGC ATATCGAGGC CACGCCCACG
CCGCAGGTCT TCGCCCTCGC CCCGGGCCAC GGCGAGCTGC TCGGGATCCT CGACAAGCTG
CTCGGCAACC TGGCCCAGGA CGGCGACGCC GGCTCCGGGC TGCGCCTGAT GGCCAGCGGC
GCGCAGGACG ACAACCTCTG GCAGCACCTG CCCGAAGGCT TCTGGCACGC CCTGCTGCTG
GCAGCGGTGA TCATCCTGCT GTCGCTGCTG TGGAACTGGC GGCTGAAGAA ACAGGTGCAG
CAGCGGCGGA TCGCCCAGAA CCAGTTGCGC GACCAGCTGG CGTTCCAGTT CTCCCTGCTC
AACGGACTGC CCACGCCGCT GTACGTGCGC GACCTGGAAG GCCGCCTGAG CACCTGCAAC
CGCGCCTACG AACAGTTCTT CGCCAGCTCG CTGGAAGAAA TGCGCGGCAC CACGCCCTCC
GAACAGGGCA TCTGCCCGCC GAGCCTGGCG CGGACCCTGG AGTTCGAATA TGGCGAACTG
CTGCAACATC GCCAGCCGCG CTACCTCGAC TGCTGCATCG AAGTGGCTGG CGAGGCGCAC
CAGATCTACC AGTGGCTGGT GCCCTTCTAC AACGCGCGCG GCAAGCTGCA GGGGCTGCTG
GGCGGCTGGA TCGATATCAG CGAACGCAAG CATCTGGAAA CCCAGCTGCG CGACGCGCGC
CAGGCCGCCA TGGCCGCCAG CGCCGCCAAG GGCCAGTTCC TCGCCAGCAT GAGCCATGAG
CTGCGCACGC CGCTCAATGC CCTGGTCGGG CTGCTGGAAC TGGAAGGCCA GCGCGCGCCC
TCGGAAAACC TGCGCATCGC CCAGCGCTCG GCCAGTTCGA TGATCGACCT GATCGGCAAT
ATCCTCGACC TGGACAAGAT CGAATCCGGC CAGATGCAAC TGGCGCCCCA ACCGACCGAC
CTGGGTTCGC TGCTGTCGGA CAGCCTCGAA CTGTTCGTCG CCCAGGCCCG CCAGCGCAAC
CTGGCGCTGG TGCTGGACTG CTCGCTGCCG GCGCAGCGCC GCTACCGGGT CGACCCGCTG
CGCCTGCGCC AGGTGCTGTA CAACCTGCTG AGCAACGCCC TGAAGTTCAC CGAGGCCGGC
CGGGTACGCC TGAGCGTGGC AGAGCGTCCG CAGGAGGACG GCCGCAGCCT GCTGGCGTTC
CGCGTCAGCG ACACCGGCAT CGGTATTCCC CGCGAACTCC AGCCACGCCT GCTGGAGCCC
TACCGCCAGG CGCATGCCGA CACCGCCCTG CGCTATGGCG GCTCCGGCCT CGGCCTGAGC
ATCTGCAGCC AGCTGGTACA GCTGATGGGC GCACGCCTCT GGCTCGACAG CGAACCTGGC
CAGGGCTGCG CAGCCGGCTT CGAGCTGTCG CTGGAGTGGC TGGTCGCCAG CGACGCCCCG
CTCAGCGCCG CACCAGCCGG CAGCGAGGCG ACGGGGGCGT TGAAGGTGCT GATCGTCGAC
GACGTCTCCA CCAATGGCCT GGTATTGCGC CAGCAACTGG CGAAACTCGG CCACGACGCC
ACCTTCGTCT GCAGCGGCGA AGACGCCCTG GACGCTTGGG AACGCGAGCG CTACGACCTT
CTCATCAGTG ACTGCAACAT GCCCGGCATG GACGGCTACG ACCTGACCCG CTGCATCCGC
GAGCGTGACA GGCAACGCGG CCTGCCGCGT CGCCTGGTGA TCGGCTACAG CGCCAGCGCC
CTGGCCGGCG AGGCCGAGCG TTGTCGCGAC GCCGGGATGG ACGAACTGAT GATCAAGCCC
GTCACGCTGG GCCGCCTGCG CGAAGTGCTC GCCGGCGTGC AGCCGGCACG CGCCGTCGAG
GCGAGCCGCG AGGCTCCCGG CGCTGGTTTC GATCTGGGCC ACGTGCAAGA CCTGGCCGGC
GCCGACCCGG ACCTGCTCAA CCGCCTGCTG GTCGAACTGC GCGGCAACCT GCGCGAGGAA
CAGCGCAGCC TGCGCCAGCC CGTGGCCGCC ACCGCGGTGG ACCAATTGGT CCATCGCCTC
AGCGGGCTCG CCTGTACCAT CGATGCTCCC GGCCTGATCC GCGCCTGCCT GAACCTGGAA
GGCGCCGTCC AGCACGGCGA GGCGGCCCTG CAACGGCAAC AGGCGCAGCT GCTGGCGGTC
ATCGGCGACC TGCTGGCGGA TGTCGAACGG CAGTTGGACG GTACGCCTTC GCCTGACTGA
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| Protein sequence | MNGTRLLPGA RRGVRLLARL ALCILASLPW QAPQASAAAQ AQPASLAQLL RMRQNLPERP
LRVAQVAHPP GQQESNGSRI LNGISDDYLQ LIGDFLALPL ERITYPSVEA SFAGLRNGEV
DLLPRASDFE RHLPGLIFSH PYLNSTPIII GRSDDQSLPP DLQGKRVLLL NHYLHPDTVR
QAYPGAILES VRGTAAGLQR LAEGGADAFL GDKTRANRYM LQRPDLKLQN KFAANLPSEG
FAFAALASRR DLVTLVDHVL ETTPDTRKHE FLQRWTPSRQ LFAPADAFAL SHGEREWLKK
KQPLRLIAQS APPYFFRNSH GQWDGLGLDV LRYLSDAYEL PLEILDAQSP AQDQRRLERG
EALLASSIPP TPERRRRLAF SMPFGVQDWA FVIRRHASSP SSLEAMAGRR LAIAGNHPLR
DYLENRYPRI DLVLTASGHE SFSLVESGEV DATLQSIHNN PRWLQEHGLR QGEHIEATPT
PQVFALAPGH GELLGILDKL LGNLAQDGDA GSGLRLMASG AQDDNLWQHL PEGFWHALLL
AAVIILLSLL WNWRLKKQVQ QRRIAQNQLR DQLAFQFSLL NGLPTPLYVR DLEGRLSTCN
RAYEQFFASS LEEMRGTTPS EQGICPPSLA RTLEFEYGEL LQHRQPRYLD CCIEVAGEAH
QIYQWLVPFY NARGKLQGLL GGWIDISERK HLETQLRDAR QAAMAASAAK GQFLASMSHE
LRTPLNALVG LLELEGQRAP SENLRIAQRS ASSMIDLIGN ILDLDKIESG QMQLAPQPTD
LGSLLSDSLE LFVAQARQRN LALVLDCSLP AQRRYRVDPL RLRQVLYNLL SNALKFTEAG
RVRLSVAERP QEDGRSLLAF RVSDTGIGIP RELQPRLLEP YRQAHADTAL RYGGSGLGLS
ICSQLVQLMG ARLWLDSEPG QGCAAGFELS LEWLVASDAP LSAAPAGSEA TGALKVLIVD
DVSTNGLVLR QQLAKLGHDA TFVCSGEDAL DAWERERYDL LISDCNMPGM DGYDLTRCIR
ERDRQRGLPR RLVIGYSASA LAGEAERCRD AGMDELMIKP VTLGRLREVL AGVQPARAVE
ASREAPGAGF DLGHVQDLAG ADPDLLNRLL VELRGNLREE QRSLRQPVAA TAVDQLVHRL
SGLACTIDAP GLIRACLNLE GAVQHGEAAL QRQQAQLLAV IGDLLADVER QLDGTPSPD
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