| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1381 |
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| Symbol | xerD |
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| ID | 5354442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1395127 |
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| End bp | 1396023 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640810434 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001346765 |
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| Protein GI | 152989006 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00360913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCC TCGAACATCC CCTGATCGAC CGTTTCCTCG ACGCCCTGTG GCTGGAAAAA
GGCCTCGCCG ACAACACCCG CGAGGCTTAT CGCAACGACC TCGAGCAGTT CAATGCCTGG
CTCGACGGCC ACGGTCTGCG CCTGGAAGGG GTGGGCCGCG ACGCCATCCT CGACCATCTG
GCCTGGCGCC TGGAGCAGGG CTACAAGGCC CGCTCGACGG CGCGCTTCCT TTCCGGCCTG
CGCGGTTTCT ACCGCTATTG CCTGCGCGAC GGCCTGATCG CCGAGGATCC CACCTTGCAG
GTGGACCTGC CGCAGTTGGG CAAACCGCTG CCCAAGTCAC TGTCGGAAGC GGACGTCGAA
GCCCTGCTGG CCGCGCCGGA AGTCGACGAT CCGCTCGGCC TGCGCGACCG CACCATGCTC
GAGGTGCTGT ATGCCTGCGG GCTGCGGGTC AGCGAACTGG TCGGCCTGAC CCTCGAGCAG
GTCAACCTGC GCCAGGGCGT GGTCAAGGTC TTCGGCAAGG GCAGCAAGGA GCGCCTGGTG
CCGCTCGGCG AGGAAGCCAT CGGCTGGCTC GAACGCTACC TGCGCGAGGC GCGCGCCGAC
CTGCTCGGCG GACGCCCCAG CGATGTGCTG TTCCCCAGCC TGCGTGGCGA GCAGATGACC
CGCCAGACCT TCTGGCATCG CATCAAGCGC CATGCGCAGG TGGCGGCGAT CGGCAAGTCG
ATCTCGCCGC ACACCCTGCG CCATGCCTTC GCCACCCACC TGCTCAACCA TGGCGCCGAC
CTGCGGGTGG TGCAGATGCT GCTCGGCCAC AGCGACCTGT CGACCACCCA GATCTACACC
CATATCGCCC GGGCCCGCTT GCAGGACCTG CACGCCCGCC ATCATCCGCG CGGCTGA
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| Protein sequence | MSTLEHPLID RFLDALWLEK GLADNTREAY RNDLEQFNAW LDGHGLRLEG VGRDAILDHL
AWRLEQGYKA RSTARFLSGL RGFYRYCLRD GLIAEDPTLQ VDLPQLGKPL PKSLSEADVE
ALLAAPEVDD PLGLRDRTML EVLYACGLRV SELVGLTLEQ VNLRQGVVKV FGKGSKERLV
PLGEEAIGWL ERYLREARAD LLGGRPSDVL FPSLRGEQMT RQTFWHRIKR HAQVAAIGKS
ISPHTLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HIARARLQDL HARHHPRG
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