| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1358 |
|---|
| Symbol | |
|---|
| ID | 5355912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1373822 |
|---|
| End bp | 1376347 |
|---|
| Gene Length | 2526 bp |
|---|
| Protein Length | 841 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640810411 |
|---|
| Product | PTS system glucose-glucoside family transporter subunit EIIA/phosphocarrier Hpr/phosphoenolpyruvate-protein phosphotransferase |
|---|
| Protein accession | YP_001346742 |
|---|
| Protein GI | 152983633 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
[COG1925] Phosphotransferase system, HPr-related proteins
[COG2190] Phosphotransferase system IIA components |
|---|
| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA AGAACCTGGC CCTCAAAGCA CCCCTGAGCG GACCCGTGAT GCCGCTCAGC
CGAGTCCCCG ATCCGGTGTT TTCCAGCGGC ACGCTGGGCG AAGGCATCGC CATCGACCCA
CTGAACGATT GCCTGCACGC GCCTTGCGCC GGGGTGGTCA GCCACCTCGC GCGGACCCGC
CACGCCCTCA GCCTGCGCGC CGACAACGGC GCCGAGCTGC TGCTGCACGT CGGCCTGGAC
ACCGTGCAAC TGCAGGGCGA AGGCTTCCAG CCACTGGTCG AGGAAGGCGC GCGGGTGATC
GAGGGCCAGC CCCTGCTGCG CTTCGACTTG GACCGTGTCG CCCGCGGCAG CCGCAGCCTG
ATCACGGTGA TGATCCTGAG CAACGGCGAA GGTTTCCAGG TGCGCCCGCT GACCACCAAC
CCGGTGGAGG TCGGCGCGCC GTTGCTGCAA TTGAGTCCGG AAAAGAGCGA AGCGCGTCCC
GCCGCGGCAT CCGCCGCCAC GGGCGAAACG CCCCAGGCCC GGGGCCTTGC GCGGGTCGCC
CACCACGGCG GCCTGCATGC GCGGCCGGCG GCGCTGTTGC GCAAGACCGC GCAAGGTTTT
TCCAGCCAGG CCGAACTGCA TTTCGCCGGC CAGGTGGCCA GCGTCGACAG CCTGGTCGGG
ATCATGGGCC TGGGAGTCGC CGAACAGGAC GAAGTGGAAG TGATCTGCCG CGGCGACGAC
AGCCAGGCGG CACTCGACGC GCTGCTCGCG GCGCTCGCCA GTGGCGCCCC GGCCACAGCG
TCCGACGCTT CGCCACGCCA TGCGCCACCA GCCACGCCAG CCGAGGCCGC GGCCGCCGGT
ACCCTGGCCG GGGTCTGCGC CGCGCCCGGC CTGGCCAGCG GACCCCTGGC CCGGCTCGGC
GCCGTCAACC TGCCCGCCGA CGGCGGCCCG CATCGGCCCG AGGAGCAGCA CATCGCCCTG
GACCAGGCCC TGCAGCGGGT GCGCGACGAC GTCCAGGGCA ACCTGCAGCA GGCCAGGCTG
CGCGGCGACG AAAACGAAGC GGCGATCTTC TCCGCCCATC TGGCGCTGCT GGAGGACCCG
GGGCTGCTGG ATGCCGCCGA CATGCTGATC GACCAGGGGG TCGGCGCCGC CCATGCCTGG
CACCGGGCGA TCCAGGCGCA GTGCGAGATT CTCCAGGCAC TGGGCAACCC GTTTCTCGCC
GAACGCGCCA ACGACCTGCG CGACCTGGAG AAACGCGCGC TGCGCGTGCT CCTCGGCGAC
GCCGCGCAAC TGCAGGTGCC GGCCGGCGCC ATCGTCGTCG CCCACGAGTT CACCCCCTCC
GACCTCGGCC CGCTGGTCGA GGCCGGCGCC GCCGGCCTGT GCATGGTCGA AGGCGGCGCC
ACCTCCCACG TGGCCATCCT CGCCCGCAGC AAGGGCCTGC CCTGCCTGGT GGCGCTCGGC
CCGTCACTGC TGGGACTGGA GGAAGGCCGG CCGGTCGTGC TCGACGGCGA GCAGGCCCGC
CTGGAACTGG CGCCCACGCC CGAACGACTG CAGCAGGTCG CCGCCGAGGT CCGGCGCCGC
GCGCAGCAAC GCCAGCGCCA GCAGGCCGAG GCCCAGCGCC AGGCGCTGAC CCGCGACGGC
CGGCGCATCG AAGTCGGCGC CAACGTCGCC TCGCCGCAGG AGGCCGCCGA AGCCTTCGCC
AACGGTGCCG ACGGGGTCGG CCTGCTACGC ACCGAGTTCC TCTTCCTCGA GCGCCGCGCC
GCGCCCGACG AAGAGGAGCA GCGCTGCGCC TACCAGGAGG TCCTGGACGC CATGGGCGAG
CGCAAGGCGA TCATCCGCAC CATCGATGTC GGCGGCGACA AGCAGCTCGA CTACCTGCCG
CTGCCCGCCG AGGAAAACCC GGCGCTGGGC CTGCGCGGCA TCCGCCTGGG CCAGGCGCGC
CCGGAACTGC TCGACCAGCA GCTGCGCGCG CTGCTGCGGG TCGAACCGCT GCAGCGCTGC
CGGATCCTGC TGCCGATGGT CAGCGAGGTC GACGAACTGC TCGCCATCCG CCAGCGCCTC
GGCGAACTGG CCGCGCAACT GGGCATCGCG CGCCTGCCCG AACTCGGCGT GATGATCGAG
GTGCCTTCCG CCGCCCTGCT CGCCGACCAG TTGGCCGAGC ACGCCGACTT CCTCTCGATC
GGCACCAACG ACCTGTCGCA GTACGCCCTG GCCATGGATC GCTGCCATGC CGGCCTCGCC
GACCGCATCG ACGCCCTGCA CCCGGCGCTG CTCCGACTGA TCGACCAGGC CTGCGCCGGC
GCCGCCCGTC ACGGACGCTG GGTCGGCGTC TGCGGGGCGC TGGCCTCGGA CCCGCTGGCG
ACGCCGGTAC TGGTCGGCCT CGGCGTCGAG GAGCTTTCCG TGGGGCCGGG CCTGGTCGGC
GAGATCAAGG CGCGGGTGCG CCAGCTCGAC GCCTCCGACT GCCGGCACAA GGCCCGCTCG
CTGCTGGAGC TGGGCAGCGC CCGGGCGGTG CGCGAAGCCT GCCTGCAACA CTGGCCGCTG
GCCTGA
|
|---|
| Protein sequence | MNNKNLALKA PLSGPVMPLS RVPDPVFSSG TLGEGIAIDP LNDCLHAPCA GVVSHLARTR
HALSLRADNG AELLLHVGLD TVQLQGEGFQ PLVEEGARVI EGQPLLRFDL DRVARGSRSL
ITVMILSNGE GFQVRPLTTN PVEVGAPLLQ LSPEKSEARP AAASAATGET PQARGLARVA
HHGGLHARPA ALLRKTAQGF SSQAELHFAG QVASVDSLVG IMGLGVAEQD EVEVICRGDD
SQAALDALLA ALASGAPATA SDASPRHAPP ATPAEAAAAG TLAGVCAAPG LASGPLARLG
AVNLPADGGP HRPEEQHIAL DQALQRVRDD VQGNLQQARL RGDENEAAIF SAHLALLEDP
GLLDAADMLI DQGVGAAHAW HRAIQAQCEI LQALGNPFLA ERANDLRDLE KRALRVLLGD
AAQLQVPAGA IVVAHEFTPS DLGPLVEAGA AGLCMVEGGA TSHVAILARS KGLPCLVALG
PSLLGLEEGR PVVLDGEQAR LELAPTPERL QQVAAEVRRR AQQRQRQQAE AQRQALTRDG
RRIEVGANVA SPQEAAEAFA NGADGVGLLR TEFLFLERRA APDEEEQRCA YQEVLDAMGE
RKAIIRTIDV GGDKQLDYLP LPAEENPALG LRGIRLGQAR PELLDQQLRA LLRVEPLQRC
RILLPMVSEV DELLAIRQRL GELAAQLGIA RLPELGVMIE VPSAALLADQ LAEHADFLSI
GTNDLSQYAL AMDRCHAGLA DRIDALHPAL LRLIDQACAG AARHGRWVGV CGALASDPLA
TPVLVGLGVE ELSVGPGLVG EIKARVRQLD ASDCRHKARS LLELGSARAV REACLQHWPL
A
|
|---|
| |