| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1341 |
|---|
| Symbol | |
|---|
| ID | 5358693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1353292 |
|---|
| End bp | 1354434 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640810395 |
|---|
| Product | putative acetylpolyamine aminohydrolase |
|---|
| Protein accession | YP_001346726 |
|---|
| Protein GI | 152986124 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.320568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAC GTACCGCTTT CTTCTTCGAC GAACTCTGCC TCTGGCACGC CGCCGGCCCG
CACGCGCTGA CCCTGCCGGT CGGCGGCTGG GTGCAACCGC CCGCCGCCGC CGGACACGCC
GAATCACCGG AAACCAAGCG CCGGCTGAAA AGCCTGCTCG ACGTGTCCGG CCTGACCGCC
CGCCTGCAAC TGCGCAGCGC GCCGCCGGCG AGCGACGAGG ACCTGCTGCG CGTGCATCCG
GCGCACTATC TGGAACGTTT CAAGGCGTTG AGCGACGCCG GCGGCGGCAG CCTCGGCCAG
GACGCGCCGA TCGGCCCGGG CAGCTACGAG ATCGCCCGAC TCTCCGCCGG CCTGGCCATC
GCCGCGCTGG ATGCGGTGCT CGCCGGCGAA GCGGACAACG CCTATGCGCT GTCGCGTCCG
CCAGGTCACC ACTGCCTGCC GGACCAGGCG ATGGGCTTCT GCTTCTTCGC CAACATCGCC
GTGGCCATCG AGGCGGCCAA GGCTCGCCAC GGCGTCGAGC GGGTCGCGGT ACTGGACTGG
GACGTGCACC ACGGCAACGG CACCCAGGCG ATCTACTACC GGCGCGACGA CGTGTTGAGC
ATTTCCCTGC ACCAGGACGG CTGCTTCCCG CCTGGCTACA GCGGCGCCGA AGACATCGGC
GAGGATCGCG GTCGCGGCTT CAACCTCAAC GTTCCGCTGC TTCCCGGCGG CGGACACGAT
GCCTACATGC AGGCCATGCA ACGCATCGTG TTGCCGGCGC TGGAGCGCTT CCGCCCGCAA
TTGATCGTGG TCGCCAGTGG CTTCGACGCC AACGCGGTGG ACCCGCTAGC GCGCATGCAA
TTGCACAGCG ACAGCTTCCG GGCGCTGACC GCGATGGTCC GCGACGCGGC CGAGCGGCAT
GCAGGCGGAC GCCTGGTGGT GGTCCACGAA GGCGGCTACT CGGAAGCCTA CGTGCCGTTC
TGCGGGCTGG CGGTGATCGA AGAACTCAGC GGCGTGCGCA GCGCGGTGCG CGACCCGCTG
CGCGACTTCA TCGAGTTGCA GCAGCCCAAC GCGGCGTTCC GCGACTTCCA GCGCCAGCGC
CTCGAAGAGC TGGCCGCACA GTTCGGCCTG TGCCCGGCGC AGCCGCTTCA AGCGGCCAGG
TAG
|
|---|
| Protein sequence | MSRRTAFFFD ELCLWHAAGP HALTLPVGGW VQPPAAAGHA ESPETKRRLK SLLDVSGLTA
RLQLRSAPPA SDEDLLRVHP AHYLERFKAL SDAGGGSLGQ DAPIGPGSYE IARLSAGLAI
AALDAVLAGE ADNAYALSRP PGHHCLPDQA MGFCFFANIA VAIEAAKARH GVERVAVLDW
DVHHGNGTQA IYYRRDDVLS ISLHQDGCFP PGYSGAEDIG EDRGRGFNLN VPLLPGGGHD
AYMQAMQRIV LPALERFRPQ LIVVASGFDA NAVDPLARMQ LHSDSFRALT AMVRDAAERH
AGGRLVVVHE GGYSEAYVPF CGLAVIEELS GVRSAVRDPL RDFIELQQPN AAFRDFQRQR
LEELAAQFGL CPAQPLQAAR
|
|---|
| |