Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1323 |
Symbol | leuA2 |
ID | 5357400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1334095 |
End bp | 1335765 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640810376 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001346707 |
Protein GI | 152989233 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.421071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATGT TGAAAGACCC TTCGCAGAAA TACCGTCCGT TCCCGGCCAT CAATCTGCCC GACCGCACCT GGCCGTCGAA GACCATCACC GAAGTGCCGA TCTGGTGCAG CTCCGACCTG CGCGACGGCA ACCAGTCGCT GATCGAGCCG ATGGACGCGG CGAAGAAGAT GCGCTTCTTC AAGACCCTGG TGCAGGTCGG CCTGAAGCAG ATCGAAGTGG CCTTCCCGTC GGCCTCGGAC ACCGACTTCA ACTTCGTCCG CGAGCTGATC GAAGGCAACC ACATCCCCGA CGACGTCACC ATCCAGGTGC TGACCCAGGC CCGCGAGGAC CTGATCACCC GCACCTTCGA ATCCCTGCGC GGGGCGAAGA AGGCCATCGT CCACGTCTAC AACGCCACCG CGCCATCGTT CCGCCGCATC GTTTTCAACC AGGACAAGCA GGGCGTCGTC GACATCGCCA CCAACGCCGC CAAGCTGATC AGGAAGCTGG CCGCCGAGCA ACCGGACACC CAGTGGTCGT TCCAGTACTC GCCGGAAATC TTCAGCTCCA CCGAGCTGGA GTTCTCGGTC GAGGTCTGCA ACGCGGTGAT CGACGTCTGG CAGCCGACCC CGGAGCACAA GATCATCCTC AACCTGCCGG CCACCGTGGA GTGCGCCACG CCGAACGTCT ACGCCGACCA GATCGAGTGG TTCGGCCGCC ACGTCAACCG GCGTGACAGC GTGATCATCA GCCTGCACAC CCACAACGAC CGCGGCACCG GCGTGGCCGC CACCGAGCTG GGCCTGATGG CCGGCGCCGA CCGCGTCGAA GGCTGCCTGT TCGGCAACGG CGAGCGCACC GGCAACGTCG ACCTGGTGAC CCTGGCGCTG AACATGTATA CCCAGGGCCT GCACCCGCAA CTGGACTTCT CCGACATCGA CGCCGTGCGC AAGGTGGTCG AGGAATGCAA CCAGCTGCCG GTCCACCCGC GCCACCCGTA CGTCGGCGAC CTGGTCCACA CCGCCTTCTC CGGCTCGCAC CAGGACGCCA TCCGCAAGGG CTTCGCCCAG CAGAAGGAAG ACGCGATCTG GGAGGTGCCC TACCTGCCGA TCGACCCGGC CGACATCGGC CGCGACTACG AGGCGGTGAT CCGGGTCAAC AGCCAGTCCG GCAAGGGCGG CATCACCTTC CTGCTCGAGC AGGAATACGG CATCAGCCTG CCGCGCCGCA TGCAGATCGA GTTCAGCCAG GTGGTACAGG GCGAGACCGA CCGTCTCGGC CTGGAGATGA CCGCCCAGCA GATCTACTCC CTGCTGGAGA ACGAGTACCT GAAGGCGACC TCGCCCTATG CCCTGGCCAG CCATCGCCTG CAGGAAGAGA ACGGCACCAG CGCCGTCGAC CTGGAAGTCA CCTTCGACGG CGAGAAGCAG CACTGGCGTG GGATCGGCAA GGGCCCGCTG GAAGCCCTGG TCGCCGCCCT GCCGGTCAAG GCGGAGATCA TGGACTACCA CGAGCACGCC ATCGGCGCCG GCGCCAACGC CAGGGCCGCG GCCTACATCG AGATCCGTCT CGAAGGCCAG CGCCCGCTGC ACGGCATCGG CATCGACGAG AACATCACCA CCGCCAGCTT CCGCGCCCTG TTCAGCGCAC TGAACCGCGC GGTGACCCAG GCCGAGGCCA AGGCGGCCTG A
|
Protein sequence | MSMLKDPSQK YRPFPAINLP DRTWPSKTIT EVPIWCSSDL RDGNQSLIEP MDAAKKMRFF KTLVQVGLKQ IEVAFPSASD TDFNFVRELI EGNHIPDDVT IQVLTQARED LITRTFESLR GAKKAIVHVY NATAPSFRRI VFNQDKQGVV DIATNAAKLI RKLAAEQPDT QWSFQYSPEI FSSTELEFSV EVCNAVIDVW QPTPEHKIIL NLPATVECAT PNVYADQIEW FGRHVNRRDS VIISLHTHND RGTGVAATEL GLMAGADRVE GCLFGNGERT GNVDLVTLAL NMYTQGLHPQ LDFSDIDAVR KVVEECNQLP VHPRHPYVGD LVHTAFSGSH QDAIRKGFAQ QKEDAIWEVP YLPIDPADIG RDYEAVIRVN SQSGKGGITF LLEQEYGISL PRRMQIEFSQ VVQGETDRLG LEMTAQQIYS LLENEYLKAT SPYALASHRL QEENGTSAVD LEVTFDGEKQ HWRGIGKGPL EALVAALPVK AEIMDYHEHA IGAGANARAA AYIEIRLEGQ RPLHGIGIDE NITTASFRAL FSALNRAVTQ AEAKAA
|
| |