| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1309 |
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| Symbol | pilF |
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| ID | 5356188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1321426 |
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| End bp | 1322184 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640810362 |
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| Product | type 4 fimbrial biogenesis protein PilF |
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| Protein accession | YP_001346693 |
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| Protein GI | 152985060 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.553345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTAC GCGCCGCGCT GGTGTTCCTG TTGGCAATCG GGCTGACGGG CTGCGTGACG
AGCGGAGATC AGAATCCCCT GAAGACCGAC AAGGGCCGTG ACGAGGCGCG CGACGCCTAC
ATCCAGCTCG GCCTGGGCTA TCTGCAGCGC GGCAGTACCG AGCAGGCCAA GGTGCCGCTG
CGCAAGGCCC TGGAGATCGA CCCCTCCAGC GTCGATGCGC ACGCCGCGCT GGCGGTGGTG
TTCCAGACCG AGATGGAACC CCGGCTGGCC GACGAGGAAT ACCGCAAGGC GCTCGCCGGC
GACAGCCGCA ACGCCCGCAT CCTGAACAAC TACGGTGGTT TCCTCTACGA GCAGAAACGC
TACGAGGAGG CCTACCGGCG CTTCGTCGAG GCCAGCCAGG ACAACCTGTA TCCCGAACGC
TCGCGTGTGT TCGAGAACCT CGGCCTGGTT TCCCTGCAAC TGAAGAGGCC GGCACAGGCC
AAGGAGTACT TCGAGAAGTC CCTGCGCCTG AACCGCAACC AGCCCCGCGT CGCGCTGGAA
ATGGCCGACC TGCTCTACAG GGAGCGCGAG TACGTGCCGG CTCGCCAGTA CTATGATCTC
TTTGCCCAGG GCGGCGGGCA GAATGCCCGT AGCCTGCTGC TGGGTATCCG TCTCGCGAAG
GTCTTCGAGG ATCGCGACAC GGCAGCCAGT TACGGCCTGC AATTGAAACG CCTGTACCCA
GGCTCTCCCG AATACAAGGA ATTCCAGGCG GAAAAATGA
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| Protein sequence | MTVRAALVFL LAIGLTGCVT SGDQNPLKTD KGRDEARDAY IQLGLGYLQR GSTEQAKVPL
RKALEIDPSS VDAHAALAVV FQTEMEPRLA DEEYRKALAG DSRNARILNN YGGFLYEQKR
YEEAYRRFVE ASQDNLYPER SRVFENLGLV SLQLKRPAQA KEYFEKSLRL NRNQPRVALE
MADLLYRERE YVPARQYYDL FAQGGGQNAR SLLLGIRLAK VFEDRDTAAS YGLQLKRLYP
GSPEYKEFQA EK
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